Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otop1Q80VM9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otop1Q80VM9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otop1Q80VM9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otop1Q80VM9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.43■□□□□ 0.54
Otop1Q80VM9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Otop1Q80VM9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otop1Q80VM9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Otop1Q80VM9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Otop1Q80VM9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otop1Q80VM9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otop1Q80VM9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otop1Q80VM9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otop1Q80VM9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otop1Q80VM9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otop1Q80VM9 Gm37856-201ENSMUST00000191634 999 ntBASIC18.42■□□□□ 0.54
Otop1Q80VM9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otop1Q80VM9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.42■□□□□ 0.54
Otop1Q80VM9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otop1Q80VM9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Otop1Q80VM9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Otop1Q80VM9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otop1Q80VM9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Otop1Q80VM9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Otop1Q80VM9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.41■□□□□ 0.54
Otop1Q80VM9 Gm6211-202ENSMUST00000167849 925 ntBASIC18.41■□□□□ 0.54
Otop1Q80VM9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Otop1Q80VM9 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.41■□□□□ 0.54
Otop1Q80VM9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Otop1Q80VM9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Otop1Q80VM9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Otop1Q80VM9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Otop1Q80VM9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.4■□□□□ 0.54
Otop1Q80VM9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Otop1Q80VM9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.4■□□□□ 0.54
Otop1Q80VM9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Otop1Q80VM9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Otop1Q80VM9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Otop1Q80VM9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Otop1Q80VM9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Otop1Q80VM9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Otop1Q80VM9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Otop1Q80VM9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Otop1Q80VM9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Otop1Q80VM9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Otop1Q80VM9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Otop1Q80VM9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.38■□□□□ 0.53
Otop1Q80VM9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.38■□□□□ 0.53
Otop1Q80VM9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.38■□□□□ 0.53
Otop1Q80VM9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.38■□□□□ 0.53
Otop1Q80VM9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Otop1Q80VM9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Otop1Q80VM9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.38■□□□□ 0.53
Otop1Q80VM9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.38■□□□□ 0.53
Otop1Q80VM9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Otop1Q80VM9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Otop1Q80VM9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Mir6982-201ENSMUST00000184354 68 ntBASIC18.37■□□□□ 0.53
Otop1Q80VM9 Trmt13-210ENSMUST00000198454 880 ntBASIC18.37■□□□□ 0.53
Otop1Q80VM9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Otop1Q80VM9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Otop1Q80VM9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Otop1Q80VM9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.36■□□□□ 0.53
Otop1Q80VM9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.36■□□□□ 0.53
Otop1Q80VM9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Otop1Q80VM9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Otop1Q80VM9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.35■□□□□ 0.53
Otop1Q80VM9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.35■□□□□ 0.53
Otop1Q80VM9 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.35■□□□□ 0.53
Otop1Q80VM9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms