Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim62Q80V85 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim62Q80V85 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim62Q80V85 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim62Q80V85 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim62Q80V85 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trim62Q80V85 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim62Q80V85 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim62Q80V85 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim62Q80V85 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim62Q80V85 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Trim62Q80V85 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim62Q80V85 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim62Q80V85 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim62Q80V85 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim62Q80V85 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
Trim62Q80V85 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim62Q80V85 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim62Q80V85 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.88■□□□□ 0.77
Trim62Q80V85 Gm13234-201ENSMUST00000120010 747 ntBASIC19.88■□□□□ 0.77
Trim62Q80V85 Gm7860-201ENSMUST00000121190 879 ntBASIC19.88■□□□□ 0.77
Trim62Q80V85 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim62Q80V85 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim62Q80V85 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.88■□□□□ 0.77
Trim62Q80V85 Gm18671-201ENSMUST00000214826 683 ntBASIC19.88■□□□□ 0.77
Trim62Q80V85 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim62Q80V85 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim62Q80V85 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim62Q80V85 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim62Q80V85 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim62Q80V85 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim62Q80V85 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim62Q80V85 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim62Q80V85 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim62Q80V85 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Trim62Q80V85 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Trim62Q80V85 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trim62Q80V85 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim62Q80V85 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim62Q80V85 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Trim62Q80V85 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim62Q80V85 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.86■□□□□ 0.77
Trim62Q80V85 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Trim62Q80V85 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim62Q80V85 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.86■□□□□ 0.77
Trim62Q80V85 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim62Q80V85 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim62Q80V85 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim62Q80V85 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim62Q80V85 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim62Q80V85 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim62Q80V85 Gm42642-201ENSMUST00000200683 355 ntBASIC19.85■□□□□ 0.77
Trim62Q80V85 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim62Q80V85 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim62Q80V85 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim62Q80V85 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim62Q80V85 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim62Q80V85 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim62Q80V85 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim62Q80V85 Reep4-203ENSMUST00000226563 1444 ntBASIC19.85■□□□□ 0.77
Trim62Q80V85 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim62Q80V85 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim62Q80V85 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim62Q80V85 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim62Q80V85 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim62Q80V85 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trim62Q80V85 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.84■□□□□ 0.77
Trim62Q80V85 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim62Q80V85 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim62Q80V85 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim62Q80V85 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim62Q80V85 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim62Q80V85 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim62Q80V85 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim62Q80V85 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim62Q80V85 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trim62Q80V85 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim62Q80V85 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim62Q80V85 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim62Q80V85 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trim62Q80V85 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trim62Q80V85 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim62Q80V85 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim62Q80V85 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim62Q80V85 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Trim62Q80V85 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim62Q80V85 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim62Q80V85 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim62Q80V85 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim62Q80V85 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim62Q80V85 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim62Q80V85 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim62Q80V85 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Trim62Q80V85 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim62Q80V85 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trim62Q80V85 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim62Q80V85 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim62Q80V85 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim62Q80V85 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim62Q80V85 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms