Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdh19Q80TF3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh19Q80TF3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh19Q80TF3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh19Q80TF3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdh19Q80TF3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pcdh19Q80TF3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdh19Q80TF3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh19Q80TF3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh19Q80TF3 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.85■□□□□ 0.61
Pcdh19Q80TF3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh19Q80TF3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh19Q80TF3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdh19Q80TF3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Pcdh19Q80TF3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.83■□□□□ 0.61
Pcdh19Q80TF3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Pcdh19Q80TF3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh19Q80TF3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pcdh19Q80TF3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh19Q80TF3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh19Q80TF3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh19Q80TF3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh19Q80TF3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh19Q80TF3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh19Q80TF3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh19Q80TF3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh19Q80TF3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdh19Q80TF3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdh19Q80TF3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh19Q80TF3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh19Q80TF3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh19Q80TF3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh19Q80TF3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh19Q80TF3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdh19Q80TF3 Gm10602-201ENSMUST00000098239 609 ntBASIC18.81■□□□□ 0.6
Pcdh19Q80TF3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh19Q80TF3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdh19Q80TF3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh19Q80TF3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh19Q80TF3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdh19Q80TF3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.81■□□□□ 0.6
Pcdh19Q80TF3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 Gm13146-201ENSMUST00000118508 780 ntBASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 Gm12933-201ENSMUST00000120203 872 ntBASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdh19Q80TF3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh19Q80TF3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh19Q80TF3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdh19Q80TF3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdh19Q80TF3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdh19Q80TF3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh19Q80TF3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdh19Q80TF3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh19Q80TF3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh19Q80TF3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh19Q80TF3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms