Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ush1gQ80T11 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ush1gQ80T11 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ush1gQ80T11 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ush1gQ80T11 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Ush1gQ80T11 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Ush1gQ80T11 Gm20760-201ENSMUST00000179197 648 ntBASIC21.04■□□□□ 0.96
Ush1gQ80T11 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ush1gQ80T11 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.04■□□□□ 0.96
Ush1gQ80T11 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ush1gQ80T11 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Gm10653-202ENSMUST00000139570 835 ntBASIC21.03■□□□□ 0.96
Ush1gQ80T11 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Gm4968-201ENSMUST00000071458 858 ntBASIC21.03■□□□□ 0.96
Ush1gQ80T11 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ush1gQ80T11 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ush1gQ80T11 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ush1gQ80T11 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ush1gQ80T11 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.02■□□□□ 0.96
Ush1gQ80T11 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ush1gQ80T11 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ush1gQ80T11 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ush1gQ80T11 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ush1gQ80T11 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.02■□□□□ 0.95
Ush1gQ80T11 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ush1gQ80T11 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ush1gQ80T11 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ush1gQ80T11 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ush1gQ80T11 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ush1gQ80T11 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ush1gQ80T11 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.01■□□□□ 0.95
Ush1gQ80T11 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ush1gQ80T11 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ush1gQ80T11 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ush1gQ80T11 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ush1gQ80T11 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ush1gQ80T11 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ush1gQ80T11 Gm42911-201ENSMUST00000199360 1630 ntBASIC21■□□□□ 0.95
Ush1gQ80T11 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ush1gQ80T11 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ush1gQ80T11 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Ush1gQ80T11 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ush1gQ80T11 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ush1gQ80T11 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Ush1gQ80T11 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ush1gQ80T11 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ush1gQ80T11 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ush1gQ80T11 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ush1gQ80T11 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ush1gQ80T11 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ush1gQ80T11 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ush1gQ80T11 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ush1gQ80T11 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ush1gQ80T11 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ush1gQ80T11 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Ush1gQ80T11 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ush1gQ80T11 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ush1gQ80T11 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.99■□□□□ 0.95
Ush1gQ80T11 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ush1gQ80T11 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ush1gQ80T11 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ush1gQ80T11 Gm7290-201ENSMUST00000104990 617 ntBASIC20.98■□□□□ 0.95
Ush1gQ80T11 Gm12918-201ENSMUST00000120234 636 ntBASIC20.98■□□□□ 0.95
Ush1gQ80T11 Gm15710-201ENSMUST00000121821 636 ntBASIC20.98■□□□□ 0.95
Ush1gQ80T11 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Ush1gQ80T11 Gm22240-201ENSMUST00000175225 82 ntBASIC20.98■□□□□ 0.95
Ush1gQ80T11 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.98■□□□□ 0.95
Ush1gQ80T11 Gm5075-201ENSMUST00000196916 622 ntBASIC20.98■□□□□ 0.95
Ush1gQ80T11 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.98■□□□□ 0.95
Ush1gQ80T11 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.98■□□□□ 0.95
Ush1gQ80T11 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.98■□□□□ 0.95
Ush1gQ80T11 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.98■□□□□ 0.95
Ush1gQ80T11 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ush1gQ80T11 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ush1gQ80T11 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ush1gQ80T11 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ush1gQ80T11 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ush1gQ80T11 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.97■□□□□ 0.95
Ush1gQ80T11 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ush1gQ80T11 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ush1gQ80T11 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ush1gQ80T11 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ush1gQ80T11 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ush1gQ80T11 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ush1gQ80T11 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ush1gQ80T11 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ush1gQ80T11 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ush1gQ80T11 Gm8520-201ENSMUST00000186517 868 ntBASIC20.96■□□□□ 0.95
Ush1gQ80T11 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ush1gQ80T11 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ush1gQ80T11 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms