Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh8Q7TSK3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh8Q7TSK3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh8Q7TSK3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh8Q7TSK3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh8Q7TSK3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh8Q7TSK3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh8Q7TSK3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdh8Q7TSK3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh8Q7TSK3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh8Q7TSK3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdh8Q7TSK3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh8Q7TSK3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdh8Q7TSK3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh8Q7TSK3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Gm10602-201ENSMUST00000098239 609 ntBASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh8Q7TSK3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh8Q7TSK3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh8Q7TSK3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh8Q7TSK3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdh8Q7TSK3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh8Q7TSK3 Gm7514-201ENSMUST00000209475 934 ntBASIC18.92■□□□□ 0.62
Pcdh8Q7TSK3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh8Q7TSK3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pcdh8Q7TSK3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh8Q7TSK3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh8Q7TSK3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.9■□□□□ 0.62
Pcdh8Q7TSK3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.9■□□□□ 0.62
Pcdh8Q7TSK3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Pcdh8Q7TSK3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh8Q7TSK3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh8Q7TSK3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh8Q7TSK3 AA386476-201ENSMUST00000098781 1665 ntBASIC18.9■□□□□ 0.62
Pcdh8Q7TSK3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh8Q7TSK3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh8Q7TSK3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh8Q7TSK3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh8Q7TSK3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh8Q7TSK3 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.89■□□□□ 0.62
Pcdh8Q7TSK3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh8Q7TSK3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh8Q7TSK3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh8Q7TSK3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh8Q7TSK3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh8Q7TSK3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh8Q7TSK3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdh8Q7TSK3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh8Q7TSK3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh8Q7TSK3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Pcdh8Q7TSK3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh8Q7TSK3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh8Q7TSK3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh8Q7TSK3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh8Q7TSK3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh8Q7TSK3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh8Q7TSK3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms