Protein–RNA interactions for Protein: Q7TMD7

Dsg4, Desmoglein-4, mousemouse

Predictions only

Length 1,041 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg4Q7TMD7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dsg4Q7TMD7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dsg4Q7TMD7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dsg4Q7TMD7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dsg4Q7TMD7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dsg4Q7TMD7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dsg4Q7TMD7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dsg4Q7TMD7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dsg4Q7TMD7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dsg4Q7TMD7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dsg4Q7TMD7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dsg4Q7TMD7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dsg4Q7TMD7 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dsg4Q7TMD7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dsg4Q7TMD7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dsg4Q7TMD7 Gm37179-201ENSMUST00000194862 823 ntBASIC18.6■□□□□ 0.57
Dsg4Q7TMD7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dsg4Q7TMD7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dsg4Q7TMD7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dsg4Q7TMD7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 Mir6236-201ENSMUST00000184437 123 ntBASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dsg4Q7TMD7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Dsg4Q7TMD7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Dsg4Q7TMD7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.58■□□□□ 0.57
Dsg4Q7TMD7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.58■□□□□ 0.56
Dsg4Q7TMD7 AV356131-201ENSMUST00000206201 750 ntBASIC18.58■□□□□ 0.56
Dsg4Q7TMD7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.58■□□□□ 0.56
Dsg4Q7TMD7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dsg4Q7TMD7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Dsg4Q7TMD7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dsg4Q7TMD7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dsg4Q7TMD7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Dsg4Q7TMD7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Gm10033-202ENSMUST00000211874 928 ntBASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dsg4Q7TMD7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dsg4Q7TMD7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Dsg4Q7TMD7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dsg4Q7TMD7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Dsg4Q7TMD7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.55■□□□□ 0.56
Dsg4Q7TMD7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dsg4Q7TMD7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Dsg4Q7TMD7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dsg4Q7TMD7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.55■□□□□ 0.56
Dsg4Q7TMD7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dsg4Q7TMD7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Dsg4Q7TMD7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dsg4Q7TMD7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dsg4Q7TMD7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dsg4Q7TMD7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dsg4Q7TMD7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.54■□□□□ 0.56
Dsg4Q7TMD7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms