Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
Npc1l1Q6T3U4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Npc1l1Q6T3U4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Npc1l1Q6T3U4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Npc1l1Q6T3U4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Npc1l1Q6T3U4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Npc1l1Q6T3U4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Npc1l1Q6T3U4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Npc1l1Q6T3U4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Npc1l1Q6T3U4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Npc1l1Q6T3U4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Npc1l1Q6T3U4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Npc1l1Q6T3U4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Npc1l1Q6T3U4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.11■■□□□ 1.29
Npc1l1Q6T3U4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.11■■□□□ 1.29
Npc1l1Q6T3U4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Npc1l1Q6T3U4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Npc1l1Q6T3U4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Npc1l1Q6T3U4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Npc1l1Q6T3U4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Npc1l1Q6T3U4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Npc1l1Q6T3U4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Npc1l1Q6T3U4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.1■■□□□ 1.29
Npc1l1Q6T3U4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Npc1l1Q6T3U4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Npc1l1Q6T3U4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Npc1l1Q6T3U4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Npc1l1Q6T3U4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Npc1l1Q6T3U4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Npc1l1Q6T3U4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Npc1l1Q6T3U4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Npc1l1Q6T3U4 Gm32699-201ENSMUST00000221728 1988 ntBASIC23.1■■□□□ 1.29
Npc1l1Q6T3U4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Npc1l1Q6T3U4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Npc1l1Q6T3U4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Npc1l1Q6T3U4 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.09■■□□□ 1.29
Npc1l1Q6T3U4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Npc1l1Q6T3U4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Npc1l1Q6T3U4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.09■■□□□ 1.29
Npc1l1Q6T3U4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.09■■□□□ 1.29
Npc1l1Q6T3U4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Npc1l1Q6T3U4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23.08■■□□□ 1.29
Npc1l1Q6T3U4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Npc1l1Q6T3U4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Npc1l1Q6T3U4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Npc1l1Q6T3U4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Npc1l1Q6T3U4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.08■■□□□ 1.28
Npc1l1Q6T3U4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Npc1l1Q6T3U4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Npc1l1Q6T3U4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Npc1l1Q6T3U4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Npc1l1Q6T3U4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Npc1l1Q6T3U4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Npc1l1Q6T3U4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.06■■□□□ 1.28
Npc1l1Q6T3U4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Npc1l1Q6T3U4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.06■■□□□ 1.28
Npc1l1Q6T3U4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Npc1l1Q6T3U4 Gm45640-201ENSMUST00000210665 1896 ntBASIC23.05■■□□□ 1.28
Npc1l1Q6T3U4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Npc1l1Q6T3U4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Npc1l1Q6T3U4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Npc1l1Q6T3U4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Npc1l1Q6T3U4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Npc1l1Q6T3U4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Npc1l1Q6T3U4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Npc1l1Q6T3U4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Npc1l1Q6T3U4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.05■■□□□ 1.28
Npc1l1Q6T3U4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Npc1l1Q6T3U4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
Npc1l1Q6T3U4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Npc1l1Q6T3U4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Npc1l1Q6T3U4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Npc1l1Q6T3U4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Npc1l1Q6T3U4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 243.7 ms