Protein–RNA interactions for Protein: Q6PFR5

Tra2a, Transformer-2 protein homolog alpha, mousemouse

Known RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2aQ6PFR5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tra2aQ6PFR5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tra2aQ6PFR5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tra2aQ6PFR5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tra2aQ6PFR5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Gm2559-201ENSMUST00000201323 363 ntBASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tra2aQ6PFR5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tra2aQ6PFR5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tra2aQ6PFR5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tra2aQ6PFR5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tra2aQ6PFR5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tra2aQ6PFR5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tra2aQ6PFR5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tra2aQ6PFR5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tra2aQ6PFR5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tra2aQ6PFR5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tra2aQ6PFR5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Tra2aQ6PFR5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.83■□□□□ 0.6
Tra2aQ6PFR5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tra2aQ6PFR5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tra2aQ6PFR5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tra2aQ6PFR5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tra2aQ6PFR5 Gm12896-201ENSMUST00000118430 226 ntBASIC18.82■□□□□ 0.6
Tra2aQ6PFR5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tra2aQ6PFR5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tra2aQ6PFR5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tra2aQ6PFR5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tra2aQ6PFR5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tra2aQ6PFR5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Tra2aQ6PFR5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tra2aQ6PFR5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tra2aQ6PFR5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tra2aQ6PFR5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tra2aQ6PFR5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tra2aQ6PFR5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tra2aQ6PFR5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tra2aQ6PFR5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tra2aQ6PFR5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tra2aQ6PFR5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tra2aQ6PFR5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tra2aQ6PFR5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tra2aQ6PFR5 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.8■□□□□ 0.6
Tra2aQ6PFR5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.8■□□□□ 0.6
Tra2aQ6PFR5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tra2aQ6PFR5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tra2aQ6PFR5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tra2aQ6PFR5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Gm5643-201ENSMUST00000117081 966 ntBASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tra2aQ6PFR5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tra2aQ6PFR5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.78■□□□□ 0.6
Tra2aQ6PFR5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tra2aQ6PFR5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.78■□□□□ 0.6
Tra2aQ6PFR5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tra2aQ6PFR5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tra2aQ6PFR5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tra2aQ6PFR5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Dio3-201ENSMUST00000097228 1449 ntBASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Gm27275-201ENSMUST00000184318 272 ntBASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tra2aQ6PFR5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tra2aQ6PFR5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tra2aQ6PFR5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms