Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.95■□□□□ 0.62
Scaf4Q6PFF0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf4Q6PFF0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf4Q6PFF0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf4Q6PFF0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.94■□□□□ 0.62
Scaf4Q6PFF0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf4Q6PFF0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf4Q6PFF0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf4Q6PFF0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf4Q6PFF0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Scaf4Q6PFF0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf4Q6PFF0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf4Q6PFF0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Scaf4Q6PFF0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf4Q6PFF0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf4Q6PFF0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.93■□□□□ 0.62
Scaf4Q6PFF0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf4Q6PFF0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf4Q6PFF0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.93■□□□□ 0.62
Scaf4Q6PFF0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf4Q6PFF0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf4Q6PFF0 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.93■□□□□ 0.62
Scaf4Q6PFF0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Scaf4Q6PFF0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf4Q6PFF0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Gm7417-201ENSMUST00000192950 473 ntBASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scaf4Q6PFF0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Scaf4Q6PFF0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scaf4Q6PFF0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scaf4Q6PFF0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scaf4Q6PFF0 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.9■□□□□ 0.62
Scaf4Q6PFF0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scaf4Q6PFF0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scaf4Q6PFF0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scaf4Q6PFF0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scaf4Q6PFF0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Scaf4Q6PFF0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scaf4Q6PFF0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scaf4Q6PFF0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.89■□□□□ 0.61
Scaf4Q6PFF0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scaf4Q6PFF0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scaf4Q6PFF0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scaf4Q6PFF0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scaf4Q6PFF0 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scaf4Q6PFF0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scaf4Q6PFF0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Scaf4Q6PFF0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.87■□□□□ 0.61
Scaf4Q6PFF0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scaf4Q6PFF0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scaf4Q6PFF0 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.87■□□□□ 0.61
Scaf4Q6PFF0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scaf4Q6PFF0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scaf4Q6PFF0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.86■□□□□ 0.61
Scaf4Q6PFF0 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.86■□□□□ 0.61
Scaf4Q6PFF0 Gm15820-201ENSMUST00000201566 728 ntBASIC18.86■□□□□ 0.61
Scaf4Q6PFF0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms