Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retreg2Q6NS82 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retreg2Q6NS82 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.6■□□□□ 0.89
Retreg2Q6NS82 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retreg2Q6NS82 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retreg2Q6NS82 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retreg2Q6NS82 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retreg2Q6NS82 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg2Q6NS82 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Retreg2Q6NS82 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg2Q6NS82 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg2Q6NS82 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg2Q6NS82 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.59■□□□□ 0.89
Retreg2Q6NS82 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.59■□□□□ 0.89
Retreg2Q6NS82 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.59■□□□□ 0.89
Retreg2Q6NS82 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg2Q6NS82 Gm10493-201ENSMUST00000097270 612 ntBASIC20.59■□□□□ 0.89
Retreg2Q6NS82 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Retreg2Q6NS82 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Retreg2Q6NS82 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg2Q6NS82 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg2Q6NS82 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg2Q6NS82 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg2Q6NS82 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg2Q6NS82 Gm42569-201ENSMUST00000200539 472 ntBASIC20.58■□□□□ 0.89
Retreg2Q6NS82 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.58■□□□□ 0.89
Retreg2Q6NS82 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.58■□□□□ 0.88
Retreg2Q6NS82 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retreg2Q6NS82 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retreg2Q6NS82 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retreg2Q6NS82 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.58■□□□□ 0.88
Retreg2Q6NS82 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Retreg2Q6NS82 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Retreg2Q6NS82 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg2Q6NS82 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg2Q6NS82 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg2Q6NS82 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.56■□□□□ 0.88
Retreg2Q6NS82 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg2Q6NS82 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg2Q6NS82 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg2Q6NS82 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Mir6236-201ENSMUST00000184437 123 ntBASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Gm42642-201ENSMUST00000200683 355 ntBASIC20.55■□□□□ 0.88
Retreg2Q6NS82 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg2Q6NS82 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Retreg2Q6NS82 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.53■□□□□ 0.88
Retreg2Q6NS82 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
Retreg2Q6NS82 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg2Q6NS82 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg2Q6NS82 Gm10849-201ENSMUST00000100397 618 ntBASIC20.53■□□□□ 0.88
Retreg2Q6NS82 Gm11421-201ENSMUST00000122124 294 ntBASIC20.53■□□□□ 0.88
Retreg2Q6NS82 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms