Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cep290Q6A078 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cep290Q6A078 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cep290Q6A078 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cep290Q6A078 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cep290Q6A078 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cep290Q6A078 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Cep290Q6A078 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cep290Q6A078 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cep290Q6A078 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cep290Q6A078 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cep290Q6A078 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.83■□□□□ 0.77
Cep290Q6A078 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Cep290Q6A078 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cep290Q6A078 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cep290Q6A078 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cep290Q6A078 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cep290Q6A078 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.83■□□□□ 0.76
Cep290Q6A078 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cep290Q6A078 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cep290Q6A078 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.83■□□□□ 0.76
Cep290Q6A078 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cep290Q6A078 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Cep290Q6A078 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cep290Q6A078 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cep290Q6A078 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cep290Q6A078 Gm5417-201ENSMUST00000079706 384 ntBASIC19.82■□□□□ 0.76
Cep290Q6A078 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cep290Q6A078 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.82■□□□□ 0.76
Cep290Q6A078 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cep290Q6A078 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cep290Q6A078 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cep290Q6A078 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cep290Q6A078 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cep290Q6A078 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cep290Q6A078 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cep290Q6A078 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cep290Q6A078 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cep290Q6A078 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.81■□□□□ 0.76
Cep290Q6A078 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cep290Q6A078 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cep290Q6A078 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cep290Q6A078 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cep290Q6A078 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cep290Q6A078 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cep290Q6A078 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cep290Q6A078 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cep290Q6A078 Gm2399-201ENSMUST00000104944 225 ntBASIC19.8■□□□□ 0.76
Cep290Q6A078 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Cep290Q6A078 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cep290Q6A078 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cep290Q6A078 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cep290Q6A078 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cep290Q6A078 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cep290Q6A078 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cep290Q6A078 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cep290Q6A078 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.79■□□□□ 0.76
Cep290Q6A078 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cep290Q6A078 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cep290Q6A078 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.79■□□□□ 0.76
Cep290Q6A078 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cep290Q6A078 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cep290Q6A078 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cep290Q6A078 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.78■□□□□ 0.76
Cep290Q6A078 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cep290Q6A078 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cep290Q6A078 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cep290Q6A078 Gm13158-201ENSMUST00000122007 736 ntBASIC19.78■□□□□ 0.76
Cep290Q6A078 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cep290Q6A078 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cep290Q6A078 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cep290Q6A078 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cep290Q6A078 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cep290Q6A078 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.77■□□□□ 0.76
Cep290Q6A078 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cep290Q6A078 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.77■□□□□ 0.76
Cep290Q6A078 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cep290Q6A078 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cep290Q6A078 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cep290Q6A078 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cep290Q6A078 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cep290Q6A078 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Cep290Q6A078 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.77■□□□□ 0.75
Cep290Q6A078 Gm44549-201ENSMUST00000208351 577 ntBASIC19.77■□□□□ 0.75
Cep290Q6A078 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cep290Q6A078 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cep290Q6A078 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cep290Q6A078 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cep290Q6A078 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cep290Q6A078 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cep290Q6A078 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cep290Q6A078 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cep290Q6A078 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cep290Q6A078 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cep290Q6A078 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cep290Q6A078 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cep290Q6A078 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cep290Q6A078 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cep290Q6A078 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cep290Q6A078 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms