Protein–RNA interactions for Protein: Q62189

Snrpa, U1 small nuclear ribonucleoprotein A, mousemouse

Known RBP Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpaQ62189 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SnrpaQ62189 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SnrpaQ62189 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.27■□□□□ 0.68
SnrpaQ62189 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SnrpaQ62189 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SnrpaQ62189 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SnrpaQ62189 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SnrpaQ62189 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SnrpaQ62189 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SnrpaQ62189 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SnrpaQ62189 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SnrpaQ62189 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SnrpaQ62189 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SnrpaQ62189 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SnrpaQ62189 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.26■□□□□ 0.67
SnrpaQ62189 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.26■□□□□ 0.67
SnrpaQ62189 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SnrpaQ62189 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SnrpaQ62189 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SnrpaQ62189 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SnrpaQ62189 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SnrpaQ62189 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SnrpaQ62189 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SnrpaQ62189 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SnrpaQ62189 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SnrpaQ62189 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SnrpaQ62189 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SnrpaQ62189 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SnrpaQ62189 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SnrpaQ62189 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SnrpaQ62189 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SnrpaQ62189 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SnrpaQ62189 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.24■□□□□ 0.67
SnrpaQ62189 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SnrpaQ62189 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
SnrpaQ62189 Gm9959-201ENSMUST00000068277 390 ntBASIC19.24■□□□□ 0.67
SnrpaQ62189 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SnrpaQ62189 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.24■□□□□ 0.67
SnrpaQ62189 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SnrpaQ62189 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SnrpaQ62189 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SnrpaQ62189 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SnrpaQ62189 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SnrpaQ62189 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SnrpaQ62189 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SnrpaQ62189 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SnrpaQ62189 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SnrpaQ62189 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SnrpaQ62189 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SnrpaQ62189 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.23■□□□□ 0.67
SnrpaQ62189 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SnrpaQ62189 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.22■□□□□ 0.67
SnrpaQ62189 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SnrpaQ62189 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SnrpaQ62189 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SnrpaQ62189 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SnrpaQ62189 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SnrpaQ62189 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SnrpaQ62189 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SnrpaQ62189 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SnrpaQ62189 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SnrpaQ62189 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SnrpaQ62189 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SnrpaQ62189 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.21■□□□□ 0.67
SnrpaQ62189 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.21■□□□□ 0.67
SnrpaQ62189 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SnrpaQ62189 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SnrpaQ62189 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SnrpaQ62189 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SnrpaQ62189 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
SnrpaQ62189 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SnrpaQ62189 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SnrpaQ62189 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SnrpaQ62189 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms