Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Foxc1Q61572 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Foxc1Q61572 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.99□□□□□ -0.17
Foxc1Q61572 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Foxc1Q61572 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.99□□□□□ -0.17
Foxc1Q61572 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
Foxc1Q61572 Smad6-203ENSMUST00000179458 273 ntBASIC13.99□□□□□ -0.17
Foxc1Q61572 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.99□□□□□ -0.17
Foxc1Q61572 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Foxc1Q61572 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxc1Q61572 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Foxc1Q61572 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Foxc1Q61572 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Foxc1Q61572 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Gm43060-201ENSMUST00000200621 289 ntBASIC13.98□□□□□ -0.17
Foxc1Q61572 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Foxc1Q61572 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.98□□□□□ -0.17
Foxc1Q61572 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxc1Q61572 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Foxc1Q61572 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Foxc1Q61572 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Foxc1Q61572 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Foxc1Q61572 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.97□□□□□ -0.17
Foxc1Q61572 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.97□□□□□ -0.17
Foxc1Q61572 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Foxc1Q61572 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxc1Q61572 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.97□□□□□ -0.17
Foxc1Q61572 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxc1Q61572 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxc1Q61572 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxc1Q61572 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxc1Q61572 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxc1Q61572 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Foxc1Q61572 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Foxc1Q61572 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Foxc1Q61572 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.96□□□□□ -0.17
Foxc1Q61572 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.96□□□□□ -0.17
Foxc1Q61572 Gm40848-201ENSMUST00000221998 324 ntBASIC13.96□□□□□ -0.17
Foxc1Q61572 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxc1Q61572 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxc1Q61572 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxc1Q61572 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.96□□□□□ -0.17
Foxc1Q61572 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxc1Q61572 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxc1Q61572 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.95□□□□□ -0.18
Foxc1Q61572 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Gm11421-201ENSMUST00000122124 294 ntBASIC13.95□□□□□ -0.18
Foxc1Q61572 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Gm29257-201ENSMUST00000186115 639 ntBASIC13.95□□□□□ -0.18
Foxc1Q61572 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.95□□□□□ -0.18
Foxc1Q61572 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.95□□□□□ -0.18
Foxc1Q61572 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Foxc1Q61572 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Foxc1Q61572 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxc1Q61572 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Foxc1Q61572 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms