Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx4Q61496 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Ddx4Q61496 Gm5643-201ENSMUST00000117081 966 ntBASIC21.23■□□□□ 0.99
Ddx4Q61496 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ddx4Q61496 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Ddx4Q61496 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx4Q61496 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ddx4Q61496 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ddx4Q61496 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.23■□□□□ 0.99
Ddx4Q61496 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx4Q61496 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx4Q61496 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx4Q61496 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Ddx4Q61496 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Ddx4Q61496 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ddx4Q61496 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ddx4Q61496 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Ddx4Q61496 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ddx4Q61496 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx4Q61496 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx4Q61496 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Ddx4Q61496 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx4Q61496 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx4Q61496 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ddx4Q61496 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx4Q61496 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx4Q61496 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx4Q61496 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx4Q61496 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx4Q61496 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx4Q61496 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx4Q61496 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx4Q61496 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.2■□□□□ 0.98
Ddx4Q61496 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Ddx4Q61496 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx4Q61496 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.19■□□□□ 0.98
Ddx4Q61496 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx4Q61496 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx4Q61496 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx4Q61496 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx4Q61496 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ddx4Q61496 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx4Q61496 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.18■□□□□ 0.98
Ddx4Q61496 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx4Q61496 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.18■□□□□ 0.98
Ddx4Q61496 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx4Q61496 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx4Q61496 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ddx4Q61496 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx4Q61496 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx4Q61496 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx4Q61496 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.17■□□□□ 0.98
Ddx4Q61496 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ddx4Q61496 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx4Q61496 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx4Q61496 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.17■□□□□ 0.98
Ddx4Q61496 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.17■□□□□ 0.98
Ddx4Q61496 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx4Q61496 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx4Q61496 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx4Q61496 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx4Q61496 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx4Q61496 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx4Q61496 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ddx4Q61496 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.16■□□□□ 0.98
Ddx4Q61496 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx4Q61496 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx4Q61496 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx4Q61496 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx4Q61496 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Ddx4Q61496 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx4Q61496 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx4Q61496 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.16■□□□□ 0.98
Ddx4Q61496 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.16■□□□□ 0.98
Ddx4Q61496 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx4Q61496 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx4Q61496 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Ddx4Q61496 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx4Q61496 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx4Q61496 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx4Q61496 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx4Q61496 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx4Q61496 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
Ddx4Q61496 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx4Q61496 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx4Q61496 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx4Q61496 Gm2559-201ENSMUST00000201323 363 ntBASIC21.15■□□□□ 0.98
Ddx4Q61496 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx4Q61496 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ddx4Q61496 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ddx4Q61496 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx4Q61496 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx4Q61496 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.14■□□□□ 0.97
Ddx4Q61496 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx4Q61496 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.14■□□□□ 0.97
Ddx4Q61496 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ddx4Q61496 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx4Q61496 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx4Q61496 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx4Q61496 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms