Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdf4Q61112 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdf4Q61112 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sdf4Q61112 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdf4Q61112 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sdf4Q61112 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdf4Q61112 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdf4Q61112 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdf4Q61112 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdf4Q61112 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdf4Q61112 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdf4Q61112 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sdf4Q61112 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.46■□□□□ 0.71
Sdf4Q61112 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.46■□□□□ 0.71
Sdf4Q61112 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdf4Q61112 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdf4Q61112 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdf4Q61112 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdf4Q61112 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdf4Q61112 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdf4Q61112 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.46■□□□□ 0.71
Sdf4Q61112 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sdf4Q61112 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdf4Q61112 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sdf4Q61112 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.45■□□□□ 0.7
Sdf4Q61112 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdf4Q61112 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdf4Q61112 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Sdf4Q61112 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sdf4Q61112 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sdf4Q61112 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sdf4Q61112 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdf4Q61112 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdf4Q61112 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.44■□□□□ 0.7
Sdf4Q61112 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sdf4Q61112 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.44■□□□□ 0.7
Sdf4Q61112 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdf4Q61112 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdf4Q61112 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdf4Q61112 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.43■□□□□ 0.7
Sdf4Q61112 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sdf4Q61112 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.43■□□□□ 0.7
Sdf4Q61112 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sdf4Q61112 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Sdf4Q61112 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdf4Q61112 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sdf4Q61112 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sdf4Q61112 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdf4Q61112 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdf4Q61112 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdf4Q61112 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdf4Q61112 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sdf4Q61112 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdf4Q61112 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdf4Q61112 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.42■□□□□ 0.7
Sdf4Q61112 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdf4Q61112 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdf4Q61112 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.42■□□□□ 0.7
Sdf4Q61112 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdf4Q61112 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sdf4Q61112 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sdf4Q61112 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.41■□□□□ 0.7
Sdf4Q61112 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdf4Q61112 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sdf4Q61112 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdf4Q61112 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.4■□□□□ 0.7
Sdf4Q61112 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Sdf4Q61112 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.4■□□□□ 0.7
Sdf4Q61112 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdf4Q61112 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdf4Q61112 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sdf4Q61112 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms