Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a4Q60857 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a4Q60857 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.74■□□□□ 0.75
Slc6a4Q60857 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Slc6a4Q60857 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.74■□□□□ 0.75
Slc6a4Q60857 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a4Q60857 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a4Q60857 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a4Q60857 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a4Q60857 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Slc6a4Q60857 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a4Q60857 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a4Q60857 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a4Q60857 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a4Q60857 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a4Q60857 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.73■□□□□ 0.75
Slc6a4Q60857 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a4Q60857 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a4Q60857 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.73■□□□□ 0.75
Slc6a4Q60857 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.73■□□□□ 0.75
Slc6a4Q60857 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a4Q60857 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a4Q60857 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.72■□□□□ 0.75
Slc6a4Q60857 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Slc6a4Q60857 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.72■□□□□ 0.75
Slc6a4Q60857 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a4Q60857 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a4Q60857 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Slc6a4Q60857 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Slc6a4Q60857 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a4Q60857 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a4Q60857 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a4Q60857 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a4Q60857 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.7■□□□□ 0.74
Slc6a4Q60857 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a4Q60857 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a4Q60857 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Slc6a4Q60857 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Slc6a4Q60857 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a4Q60857 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a4Q60857 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a4Q60857 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a4Q60857 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a4Q60857 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a4Q60857 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a4Q60857 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a4Q60857 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Slc6a4Q60857 Gm13534-201ENSMUST00000121169 513 ntBASIC19.68■□□□□ 0.74
Slc6a4Q60857 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Slc6a4Q60857 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Slc6a4Q60857 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a4Q60857 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a4Q60857 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a4Q60857 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Slc6a4Q60857 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a4Q60857 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.67■□□□□ 0.74
Slc6a4Q60857 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Slc6a4Q60857 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a4Q60857 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a4Q60857 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a4Q60857 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.67■□□□□ 0.74
Slc6a4Q60857 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.66■□□□□ 0.74
Slc6a4Q60857 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.66■□□□□ 0.74
Slc6a4Q60857 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms