Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Satb1Q60611 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Satb1Q60611 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.81■□□□□ 0.76
Satb1Q60611 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Satb1Q60611 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Satb1Q60611 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Satb1Q60611 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Satb1Q60611 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Satb1Q60611 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
Satb1Q60611 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Satb1Q60611 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.8■□□□□ 0.76
Satb1Q60611 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Satb1Q60611 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Satb1Q60611 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Satb1Q60611 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Satb1Q60611 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Satb1Q60611 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Satb1Q60611 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Satb1Q60611 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Satb1Q60611 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Satb1Q60611 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.79■□□□□ 0.76
Satb1Q60611 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Satb1Q60611 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Satb1Q60611 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Satb1Q60611 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Satb1Q60611 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Satb1Q60611 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Satb1Q60611 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Satb1Q60611 Gm7290-201ENSMUST00000104990 617 ntBASIC19.78■□□□□ 0.76
Satb1Q60611 Gm12918-201ENSMUST00000120234 636 ntBASIC19.78■□□□□ 0.76
Satb1Q60611 Gm15710-201ENSMUST00000121821 636 ntBASIC19.78■□□□□ 0.76
Satb1Q60611 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.78■□□□□ 0.76
Satb1Q60611 Gm5075-201ENSMUST00000196916 622 ntBASIC19.78■□□□□ 0.76
Satb1Q60611 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.78■□□□□ 0.76
Satb1Q60611 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.78■□□□□ 0.76
Satb1Q60611 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.78■□□□□ 0.76
Satb1Q60611 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.78■□□□□ 0.76
Satb1Q60611 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Satb1Q60611 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Satb1Q60611 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Satb1Q60611 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Satb1Q60611 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.77■□□□□ 0.76
Satb1Q60611 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.77■□□□□ 0.76
Satb1Q60611 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.77■□□□□ 0.76
Satb1Q60611 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Satb1Q60611 Trmt13-210ENSMUST00000198454 880 ntBASIC19.77■□□□□ 0.76
Satb1Q60611 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Satb1Q60611 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Satb1Q60611 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Satb1Q60611 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.77■□□□□ 0.76
Satb1Q60611 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Satb1Q60611 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Satb1Q60611 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Satb1Q60611 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Satb1Q60611 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Satb1Q60611 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Satb1Q60611 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Satb1Q60611 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.76■□□□□ 0.75
Satb1Q60611 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Satb1Q60611 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Satb1Q60611 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.76■□□□□ 0.75
Satb1Q60611 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Satb1Q60611 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Satb1Q60611 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Satb1Q60611 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Satb1Q60611 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.76■□□□□ 0.75
Satb1Q60611 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Satb1Q60611 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Satb1Q60611 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Satb1Q60611 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Satb1Q60611 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Satb1Q60611 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Satb1Q60611 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Satb1Q60611 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Satb1Q60611 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Satb1Q60611 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Satb1Q60611 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Satb1Q60611 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Satb1Q60611 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Satb1Q60611 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.74■□□□□ 0.75
Satb1Q60611 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Satb1Q60611 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Satb1Q60611 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Satb1Q60611 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Satb1Q60611 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Satb1Q60611 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.73■□□□□ 0.75
Satb1Q60611 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Satb1Q60611 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Satb1Q60611 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Satb1Q60611 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.73■□□□□ 0.75
Satb1Q60611 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Satb1Q60611 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Satb1Q60611 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Satb1Q60611 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.73■□□□□ 0.75
Satb1Q60611 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.73■□□□□ 0.75
Satb1Q60611 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.73■□□□□ 0.75
Satb1Q60611 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Satb1Q60611 Gm6365-201ENSMUST00000054711 744 ntBASIC19.73■□□□□ 0.75
Satb1Q60611 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Satb1Q60611 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms