Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Gm20760-201ENSMUST00000179197 648 ntBASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Gm10653-202ENSMUST00000139570 835 ntBASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Gm6211-202ENSMUST00000167849 925 ntBASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav6-2Q5R1I4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-2Q5R1I4 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.9■□□□□ 0.3
Trav6-2Q5R1I4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-2Q5R1I4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-2Q5R1I4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-2Q5R1I4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.9■□□□□ 0.3
Trav6-2Q5R1I4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-2Q5R1I4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Trav6-2Q5R1I4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-2Q5R1I4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-2Q5R1I4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav6-2Q5R1I4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-2Q5R1I4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav6-2Q5R1I4 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.88■□□□□ 0.29
Trav6-2Q5R1I4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-2Q5R1I4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav6-2Q5R1I4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trav6-2Q5R1I4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-2Q5R1I4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav6-2Q5R1I4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-2Q5R1I4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav6-2Q5R1I4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-2Q5R1I4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-2Q5R1I4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-2Q5R1I4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav6-2Q5R1I4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-2Q5R1I4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav6-2Q5R1I4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-2Q5R1I4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-2Q5R1I4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-2Q5R1I4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav6-2Q5R1I4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-2Q5R1I4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trav6-2Q5R1I4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-2Q5R1I4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.85■□□□□ 0.29
Trav6-2Q5R1I4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-2Q5R1I4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms