Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps13aQ5H8C4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Vps13aQ5H8C4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps13aQ5H8C4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps13aQ5H8C4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.34■□□□□ 0.69
Vps13aQ5H8C4 Mir6236-201ENSMUST00000184437 123 ntBASIC19.34■□□□□ 0.69
Vps13aQ5H8C4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.34■□□□□ 0.69
Vps13aQ5H8C4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps13aQ5H8C4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps13aQ5H8C4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps13aQ5H8C4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps13aQ5H8C4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps13aQ5H8C4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps13aQ5H8C4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps13aQ5H8C4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Vps13aQ5H8C4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps13aQ5H8C4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.33■□□□□ 0.69
Vps13aQ5H8C4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps13aQ5H8C4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps13aQ5H8C4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps13aQ5H8C4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps13aQ5H8C4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vps13aQ5H8C4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.33■□□□□ 0.68
Vps13aQ5H8C4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps13aQ5H8C4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Gm6659-201ENSMUST00000174752 547 ntBASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps13aQ5H8C4 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.31■□□□□ 0.68
Vps13aQ5H8C4 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.3■□□□□ 0.68
Vps13aQ5H8C4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps13aQ5H8C4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps13aQ5H8C4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps13aQ5H8C4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.3■□□□□ 0.68
Vps13aQ5H8C4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps13aQ5H8C4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Vps13aQ5H8C4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps13aQ5H8C4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Vps13aQ5H8C4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Vps13aQ5H8C4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps13aQ5H8C4 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.29■□□□□ 0.68
Vps13aQ5H8C4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps13aQ5H8C4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Vps13aQ5H8C4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.29■□□□□ 0.68
Vps13aQ5H8C4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps13aQ5H8C4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.29■□□□□ 0.68
Vps13aQ5H8C4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps13aQ5H8C4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps13aQ5H8C4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps13aQ5H8C4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps13aQ5H8C4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps13aQ5H8C4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps13aQ5H8C4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps13aQ5H8C4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.28■□□□□ 0.68
Vps13aQ5H8C4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps13aQ5H8C4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps13aQ5H8C4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps13aQ5H8C4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Vps13aQ5H8C4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vps13aQ5H8C4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.27■□□□□ 0.68
Vps13aQ5H8C4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vps13aQ5H8C4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.27■□□□□ 0.68
Vps13aQ5H8C4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps13aQ5H8C4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Vps13aQ5H8C4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps13aQ5H8C4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vps13aQ5H8C4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms