Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Bdp1Q571C7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Bdp1Q571C7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Bdp1Q571C7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Bdp1Q571C7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Bdp1Q571C7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Bdp1Q571C7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Bdp1Q571C7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Bdp1Q571C7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Bdp1Q571C7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Bdp1Q571C7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.76■□□□□ 0.75
Bdp1Q571C7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Bdp1Q571C7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Bdp1Q571C7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Bdp1Q571C7 Gm44771-201ENSMUST00000206975 626 ntBASIC19.75■□□□□ 0.75
Bdp1Q571C7 Gm5867-201ENSMUST00000063197 592 ntBASIC19.75■□□□□ 0.75
Bdp1Q571C7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Bdp1Q571C7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Bdp1Q571C7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Bdp1Q571C7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Bdp1Q571C7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Bdp1Q571C7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Bdp1Q571C7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.75■□□□□ 0.75
Bdp1Q571C7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.75■□□□□ 0.75
Bdp1Q571C7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Bdp1Q571C7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Bdp1Q571C7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Bdp1Q571C7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Bdp1Q571C7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Bdp1Q571C7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Bdp1Q571C7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Bdp1Q571C7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.73■□□□□ 0.75
Bdp1Q571C7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Bdp1Q571C7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Bdp1Q571C7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Bdp1Q571C7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Bdp1Q571C7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
Bdp1Q571C7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Bdp1Q571C7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Bdp1Q571C7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Bdp1Q571C7 Gm44549-201ENSMUST00000208351 577 ntBASIC19.71■□□□□ 0.75
Bdp1Q571C7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Bdp1Q571C7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Bdp1Q571C7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Bdp1Q571C7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Bdp1Q571C7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Bdp1Q571C7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Bdp1Q571C7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.7■□□□□ 0.74
Bdp1Q571C7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Bdp1Q571C7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Bdp1Q571C7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Bdp1Q571C7 Gm10013-201ENSMUST00000106074 672 ntBASIC19.7■□□□□ 0.74
Bdp1Q571C7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Bdp1Q571C7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Bdp1Q571C7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Bdp1Q571C7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Bdp1Q571C7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.69■□□□□ 0.74
Bdp1Q571C7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Bdp1Q571C7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.69■□□□□ 0.74
Bdp1Q571C7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Bdp1Q571C7 Gm13559-201ENSMUST00000120476 863 ntBASIC19.69■□□□□ 0.74
Bdp1Q571C7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.69■□□□□ 0.74
Bdp1Q571C7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Bdp1Q571C7 Gm33142-201ENSMUST00000193913 867 ntBASIC19.68■□□□□ 0.74
Bdp1Q571C7 Gm30025-201ENSMUST00000218555 728 ntBASIC19.68■□□□□ 0.74
Bdp1Q571C7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Bdp1Q571C7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Bdp1Q571C7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Bdp1Q571C7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Bdp1Q571C7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Bdp1Q571C7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Bdp1Q571C7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Bdp1Q571C7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.68■□□□□ 0.74
Bdp1Q571C7 Gm6345-202ENSMUST00000180900 204 ntBASIC19.68■□□□□ 0.74
Bdp1Q571C7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.68■□□□□ 0.74
Bdp1Q571C7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Bdp1Q571C7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.68■□□□□ 0.74
Bdp1Q571C7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.68■□□□□ 0.74
Bdp1Q571C7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Bdp1Q571C7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.67■□□□□ 0.74
Bdp1Q571C7 Gm11539-201ENSMUST00000119837 557 ntBASIC19.67■□□□□ 0.74
Bdp1Q571C7 Gm13436-201ENSMUST00000120418 567 ntBASIC19.67■□□□□ 0.74
Bdp1Q571C7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Bdp1Q571C7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.67■□□□□ 0.74
Bdp1Q571C7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Bdp1Q571C7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Bdp1Q571C7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Bdp1Q571C7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Bdp1Q571C7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms