Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm1Q52KI8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Gm13836-201ENSMUST00000121159 501 ntBASIC21.59■■□□□ 1.05
Srrm1Q52KI8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm1Q52KI8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Srrm1Q52KI8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Srrm1Q52KI8 Rab3c-203ENSMUST00000224180 967 ntBASIC21.58■■□□□ 1.05
Srrm1Q52KI8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Srrm1Q52KI8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Srrm1Q52KI8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Srrm1Q52KI8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Gm12896-201ENSMUST00000118430 226 ntBASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Srrm1Q52KI8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Srrm1Q52KI8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Srrm1Q52KI8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Srrm1Q52KI8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Srrm1Q52KI8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Srrm1Q52KI8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Srrm1Q52KI8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Srrm1Q52KI8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Srrm1Q52KI8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Srrm1Q52KI8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Srrm1Q52KI8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Srrm1Q52KI8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Srrm1Q52KI8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Srrm1Q52KI8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Srrm1Q52KI8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Srrm1Q52KI8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Srrm1Q52KI8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Srrm1Q52KI8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.55■■□□□ 1.04
Srrm1Q52KI8 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.55■■□□□ 1.04
Srrm1Q52KI8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Srrm1Q52KI8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.55■■□□□ 1.04
Srrm1Q52KI8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Srrm1Q52KI8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Srrm1Q52KI8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.54■■□□□ 1.04
Srrm1Q52KI8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Srrm1Q52KI8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.54■■□□□ 1.04
Srrm1Q52KI8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Srrm1Q52KI8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Srrm1Q52KI8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Srrm1Q52KI8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Srrm1Q52KI8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Srrm1Q52KI8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Srrm1Q52KI8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Srrm1Q52KI8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.53■■□□□ 1.04
Srrm1Q52KI8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Srrm1Q52KI8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.53■■□□□ 1.04
Srrm1Q52KI8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Srrm1Q52KI8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Srrm1Q52KI8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Srrm1Q52KI8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Srrm1Q52KI8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Srrm1Q52KI8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Srrm1Q52KI8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Srrm1Q52KI8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.52■■□□□ 1.04
Srrm1Q52KI8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Srrm1Q52KI8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Srrm1Q52KI8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Srrm1Q52KI8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Srrm1Q52KI8 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.52■■□□□ 1.04
Srrm1Q52KI8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.52■■□□□ 1.03
Srrm1Q52KI8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Srrm1Q52KI8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Srrm1Q52KI8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Srrm1Q52KI8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Srrm1Q52KI8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Srrm1Q52KI8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms