Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Spire1Q52KF3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Spire1Q52KF3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Spire1Q52KF3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Spire1Q52KF3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.65■□□□□ 0.74
Spire1Q52KF3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Spire1Q52KF3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Spire1Q52KF3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Spire1Q52KF3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Spire1Q52KF3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Spire1Q52KF3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.64■□□□□ 0.73
Spire1Q52KF3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Spire1Q52KF3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Spire1Q52KF3 Gm8520-201ENSMUST00000186517 868 ntBASIC19.64■□□□□ 0.73
Spire1Q52KF3 Gm20049-201ENSMUST00000219950 730 ntBASIC19.64■□□□□ 0.73
Spire1Q52KF3 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.64■□□□□ 0.73
Spire1Q52KF3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Spire1Q52KF3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Spire1Q52KF3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Spire1Q52KF3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Spire1Q52KF3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Spire1Q52KF3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Spire1Q52KF3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Spire1Q52KF3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Spire1Q52KF3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Spire1Q52KF3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Spire1Q52KF3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Spire1Q52KF3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Spire1Q52KF3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Spire1Q52KF3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Spire1Q52KF3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
Spire1Q52KF3 Gm22240-201ENSMUST00000175225 82 ntBASIC19.63■□□□□ 0.73
Spire1Q52KF3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Spire1Q52KF3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Spire1Q52KF3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.63■□□□□ 0.73
Spire1Q52KF3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Spire1Q52KF3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Spire1Q52KF3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Spire1Q52KF3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Spire1Q52KF3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Spire1Q52KF3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Spire1Q52KF3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Spire1Q52KF3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Spire1Q52KF3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Spire1Q52KF3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Spire1Q52KF3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Spire1Q52KF3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Spire1Q52KF3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Spire1Q52KF3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Spire1Q52KF3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Spire1Q52KF3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Spire1Q52KF3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Spire1Q52KF3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.61■□□□□ 0.73
Spire1Q52KF3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.61■□□□□ 0.73
Spire1Q52KF3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Spire1Q52KF3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Spire1Q52KF3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Spire1Q52KF3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Spire1Q52KF3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Spire1Q52KF3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Spire1Q52KF3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Spire1Q52KF3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.6■□□□□ 0.73
Spire1Q52KF3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Spire1Q52KF3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Spire1Q52KF3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.6■□□□□ 0.73
Spire1Q52KF3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Spire1Q52KF3 Gm26524-201ENSMUST00000192339 390 ntBASIC19.6■□□□□ 0.73
Spire1Q52KF3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Spire1Q52KF3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Spire1Q52KF3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Spire1Q52KF3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Spire1Q52KF3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.59■□□□□ 0.73
Spire1Q52KF3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.59■□□□□ 0.73
Spire1Q52KF3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Spire1Q52KF3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.59■□□□□ 0.73
Spire1Q52KF3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Spire1Q52KF3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Spire1Q52KF3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Spire1Q52KF3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.59■□□□□ 0.73
Spire1Q52KF3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Spire1Q52KF3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Spire1Q52KF3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Spire1Q52KF3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Spire1Q52KF3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Spire1Q52KF3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Spire1Q52KF3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Spire1Q52KF3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.58■□□□□ 0.72
Spire1Q52KF3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Spire1Q52KF3 Rab3c-203ENSMUST00000224180 967 ntBASIC19.58■□□□□ 0.72
Spire1Q52KF3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Spire1Q52KF3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Spire1Q52KF3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Spire1Q52KF3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Spire1Q52KF3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.57■□□□□ 0.72
Spire1Q52KF3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Spire1Q52KF3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.57■□□□□ 0.72
Spire1Q52KF3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Spire1Q52KF3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Spire1Q52KF3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Spire1Q52KF3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms