Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Gm27801-201ENSMUST00000184174 223 ntBASIC16.33■□□□□ 0.2
Tmem40Q4FJU9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem40Q4FJU9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Tmem40Q4FJU9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem40Q4FJU9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.33■□□□□ 0.2
Tmem40Q4FJU9 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.33■□□□□ 0.2
Tmem40Q4FJU9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem40Q4FJU9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem40Q4FJU9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem40Q4FJU9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tmem40Q4FJU9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem40Q4FJU9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem40Q4FJU9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem40Q4FJU9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem40Q4FJU9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem40Q4FJU9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem40Q4FJU9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tmem40Q4FJU9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem40Q4FJU9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem40Q4FJU9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem40Q4FJU9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tmem40Q4FJU9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem40Q4FJU9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmem40Q4FJU9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tmem40Q4FJU9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tmem40Q4FJU9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Tmem40Q4FJU9 Gm12441-201ENSMUST00000121806 588 ntBASIC16.29■□□□□ 0.2
Tmem40Q4FJU9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tmem40Q4FJU9 Nespas-201ENSMUST00000143738 1083 ntBASIC16.29■□□□□ 0.2
Tmem40Q4FJU9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.29■□□□□ 0.2
Tmem40Q4FJU9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmem40Q4FJU9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmem40Q4FJU9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmem40Q4FJU9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tmem40Q4FJU9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmem40Q4FJU9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmem40Q4FJU9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmem40Q4FJU9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmem40Q4FJU9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.28■□□□□ 0.2
Tmem40Q4FJU9 Mir5133-201ENSMUST00000174955 77 ntBASIC16.28■□□□□ 0.2
Tmem40Q4FJU9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tmem40Q4FJU9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tmem40Q4FJU9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmem40Q4FJU9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tmem40Q4FJU9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tmem40Q4FJU9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tmem40Q4FJU9 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.27■□□□□ 0.2
Tmem40Q4FJU9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tmem40Q4FJU9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tmem40Q4FJU9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tmem40Q4FJU9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.27■□□□□ 0.2
Tmem40Q4FJU9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tmem40Q4FJU9 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.27■□□□□ 0.19
Tmem40Q4FJU9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmem40Q4FJU9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Tmem40Q4FJU9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tmem40Q4FJU9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tmem40Q4FJU9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tmem40Q4FJU9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms