Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1brtQ3UNC9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1brtQ3UNC9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1brtQ3UNC9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1brtQ3UNC9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cks1brtQ3UNC9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms