Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp30Q3UN04 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp30Q3UN04 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp30Q3UN04 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp30Q3UN04 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp30Q3UN04 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp30Q3UN04 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp30Q3UN04 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Usp30Q3UN04 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp30Q3UN04 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp30Q3UN04 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp30Q3UN04 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp30Q3UN04 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.33■□□□□ 0.68
Usp30Q3UN04 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp30Q3UN04 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp30Q3UN04 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
Usp30Q3UN04 Nespas-201ENSMUST00000143738 1083 ntBASIC19.32■□□□□ 0.68
Usp30Q3UN04 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp30Q3UN04 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Usp30Q3UN04 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Usp30Q3UN04 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp30Q3UN04 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp30Q3UN04 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp30Q3UN04 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp30Q3UN04 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp30Q3UN04 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp30Q3UN04 Gm13148-201ENSMUST00000118892 745 ntBASIC19.31■□□□□ 0.68
Usp30Q3UN04 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp30Q3UN04 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp30Q3UN04 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.31■□□□□ 0.68
Usp30Q3UN04 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.31■□□□□ 0.68
Usp30Q3UN04 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp30Q3UN04 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.31■□□□□ 0.68
Usp30Q3UN04 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Usp30Q3UN04 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Usp30Q3UN04 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.3■□□□□ 0.68
Usp30Q3UN04 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.3■□□□□ 0.68
Usp30Q3UN04 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp30Q3UN04 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp30Q3UN04 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp30Q3UN04 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp30Q3UN04 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp30Q3UN04 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp30Q3UN04 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Usp30Q3UN04 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp30Q3UN04 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp30Q3UN04 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp30Q3UN04 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp30Q3UN04 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.29■□□□□ 0.68
Usp30Q3UN04 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp30Q3UN04 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.29■□□□□ 0.68
Usp30Q3UN04 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.29■□□□□ 0.68
Usp30Q3UN04 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp30Q3UN04 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp30Q3UN04 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp30Q3UN04 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp30Q3UN04 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp30Q3UN04 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Usp30Q3UN04 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp30Q3UN04 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp30Q3UN04 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Usp30Q3UN04 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp30Q3UN04 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp30Q3UN04 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp30Q3UN04 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp30Q3UN04 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp30Q3UN04 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp30Q3UN04 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp30Q3UN04 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Gm6211-202ENSMUST00000167849 925 ntBASIC19.27■□□□□ 0.68
Usp30Q3UN04 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.27■□□□□ 0.68
Usp30Q3UN04 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Usp30Q3UN04 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Usp30Q3UN04 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp30Q3UN04 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.26■□□□□ 0.67
Usp30Q3UN04 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp30Q3UN04 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms