Protein–RNA interactions for Protein: Q3UH99

Shisa6, Protein shisa-6 homolog, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa6Q3UH99 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Shisa6Q3UH99 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa6Q3UH99 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa6Q3UH99 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa6Q3UH99 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa6Q3UH99 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa6Q3UH99 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Shisa6Q3UH99 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa6Q3UH99 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa6Q3UH99 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.43■□□□□ 0.38
Shisa6Q3UH99 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa6Q3UH99 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa6Q3UH99 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa6Q3UH99 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa6Q3UH99 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa6Q3UH99 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa6Q3UH99 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa6Q3UH99 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Gm12527-201ENSMUST00000117967 564 ntBASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.41■□□□□ 0.38
Shisa6Q3UH99 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Shisa6Q3UH99 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa6Q3UH99 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.41■□□□□ 0.38
Shisa6Q3UH99 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Shisa6Q3UH99 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.39■□□□□ 0.37
Shisa6Q3UH99 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa6Q3UH99 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa6Q3UH99 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Shisa6Q3UH99 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Shisa6Q3UH99 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa6Q3UH99 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa6Q3UH99 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.39■□□□□ 0.37
Shisa6Q3UH99 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa6Q3UH99 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa6Q3UH99 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Shisa6Q3UH99 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa6Q3UH99 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.38■□□□□ 0.37
Shisa6Q3UH99 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.38■□□□□ 0.37
Shisa6Q3UH99 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Shisa6Q3UH99 Gm10653-202ENSMUST00000139570 835 ntBASIC17.38■□□□□ 0.37
Shisa6Q3UH99 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa6Q3UH99 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Shisa6Q3UH99 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa6Q3UH99 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa6Q3UH99 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa6Q3UH99 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa6Q3UH99 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa6Q3UH99 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa6Q3UH99 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa6Q3UH99 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa6Q3UH99 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa6Q3UH99 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa6Q3UH99 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa6Q3UH99 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Shisa6Q3UH99 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Shisa6Q3UH99 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa6Q3UH99 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms