Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc4Q3TCX3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc4Q3TCX3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Khdc4Q3TCX3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc4Q3TCX3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
Khdc4Q3TCX3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc4Q3TCX3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.23■□□□□ 0.51
Khdc4Q3TCX3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc4Q3TCX3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc4Q3TCX3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.23■□□□□ 0.51
Khdc4Q3TCX3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc4Q3TCX3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc4Q3TCX3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc4Q3TCX3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc4Q3TCX3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc4Q3TCX3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Khdc4Q3TCX3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc4Q3TCX3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc4Q3TCX3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc4Q3TCX3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc4Q3TCX3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc4Q3TCX3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc4Q3TCX3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc4Q3TCX3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc4Q3TCX3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.2■□□□□ 0.5
Khdc4Q3TCX3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc4Q3TCX3 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.2■□□□□ 0.5
Khdc4Q3TCX3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc4Q3TCX3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Khdc4Q3TCX3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc4Q3TCX3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Khdc4Q3TCX3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc4Q3TCX3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc4Q3TCX3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc4Q3TCX3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc4Q3TCX3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms