Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptchd3Q0EEE2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptchd3Q0EEE2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptchd3Q0EEE2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Ptchd3Q0EEE2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
Ptchd3Q0EEE2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ptchd3Q0EEE2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptchd3Q0EEE2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ptchd3Q0EEE2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptchd3Q0EEE2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.48■□□□□ 0.55
Ptchd3Q0EEE2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ptchd3Q0EEE2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Ptchd3Q0EEE2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ptchd3Q0EEE2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptchd3Q0EEE2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptchd3Q0EEE2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ptchd3Q0EEE2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptchd3Q0EEE2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Ptchd3Q0EEE2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ptchd3Q0EEE2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ptchd3Q0EEE2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ptchd3Q0EEE2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptchd3Q0EEE2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ptchd3Q0EEE2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.45■□□□□ 0.54
Ptchd3Q0EEE2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Ptchd3Q0EEE2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptchd3Q0EEE2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ptchd3Q0EEE2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Gm43530-201ENSMUST00000195920 274 ntBASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptchd3Q0EEE2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Mir6236-201ENSMUST00000184437 123 ntBASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ptchd3Q0EEE2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptchd3Q0EEE2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ptchd3Q0EEE2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptchd3Q0EEE2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.41■□□□□ 0.54
Ptchd3Q0EEE2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptchd3Q0EEE2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ptchd3Q0EEE2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.41■□□□□ 0.54
Ptchd3Q0EEE2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms