Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hspg2Q05793 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hspg2Q05793 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Hspg2Q05793 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hspg2Q05793 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hspg2Q05793 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hspg2Q05793 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hspg2Q05793 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hspg2Q05793 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hspg2Q05793 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hspg2Q05793 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hspg2Q05793 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hspg2Q05793 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hspg2Q05793 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hspg2Q05793 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.38□□□□□ -0.11
Hspg2Q05793 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hspg2Q05793 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.38□□□□□ -0.11
Hspg2Q05793 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hspg2Q05793 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hspg2Q05793 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hspg2Q05793 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hspg2Q05793 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.38□□□□□ -0.11
Hspg2Q05793 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hspg2Q05793 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.38□□□□□ -0.11
Hspg2Q05793 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hspg2Q05793 Gm11643-201ENSMUST00000119578 864 ntBASIC14.38□□□□□ -0.11
Hspg2Q05793 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hspg2Q05793 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hspg2Q05793 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.37□□□□□ -0.11
Hspg2Q05793 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hspg2Q05793 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hspg2Q05793 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hspg2Q05793 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hspg2Q05793 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hspg2Q05793 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hspg2Q05793 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hspg2Q05793 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hspg2Q05793 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hspg2Q05793 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hspg2Q05793 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hspg2Q05793 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
Hspg2Q05793 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hspg2Q05793 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hspg2Q05793 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Hspg2Q05793 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.36□□□□□ -0.11
Hspg2Q05793 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hspg2Q05793 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hspg2Q05793 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hspg2Q05793 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hspg2Q05793 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hspg2Q05793 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hspg2Q05793 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hspg2Q05793 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hspg2Q05793 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.35□□□□□ -0.11
Hspg2Q05793 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.35□□□□□ -0.11
Hspg2Q05793 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.35□□□□□ -0.11
Hspg2Q05793 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.35□□□□□ -0.11
Hspg2Q05793 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hspg2Q05793 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hspg2Q05793 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hspg2Q05793 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hspg2Q05793 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hspg2Q05793 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hspg2Q05793 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.34□□□□□ -0.11
Hspg2Q05793 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hspg2Q05793 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hspg2Q05793 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hspg2Q05793 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hspg2Q05793 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hspg2Q05793 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.34□□□□□ -0.11
Hspg2Q05793 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Hspg2Q05793 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.33□□□□□ -0.11
Hspg2Q05793 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hspg2Q05793 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hspg2Q05793 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hspg2Q05793 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.33□□□□□ -0.12
Hspg2Q05793 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hspg2Q05793 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hspg2Q05793 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hspg2Q05793 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hspg2Q05793 Gm12896-201ENSMUST00000118430 226 ntBASIC14.33□□□□□ -0.12
Hspg2Q05793 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.33□□□□□ -0.12
Hspg2Q05793 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hspg2Q05793 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hspg2Q05793 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hspg2Q05793 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hspg2Q05793 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hspg2Q05793 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hspg2Q05793 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms