Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smad4P97471 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.43■□□□□ 0.7
Smad4P97471 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.43■□□□□ 0.7
Smad4P97471 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.43■□□□□ 0.7
Smad4P97471 Gm43799-201ENSMUST00000201845 579 ntBASIC19.43■□□□□ 0.7
Smad4P97471 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smad4P97471 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smad4P97471 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smad4P97471 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.42■□□□□ 0.7
Smad4P97471 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.42■□□□□ 0.7
Smad4P97471 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smad4P97471 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smad4P97471 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smad4P97471 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smad4P97471 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.41■□□□□ 0.7
Smad4P97471 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.41■□□□□ 0.7
Smad4P97471 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smad4P97471 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smad4P97471 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smad4P97471 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smad4P97471 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smad4P97471 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smad4P97471 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smad4P97471 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Smad4P97471 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smad4P97471 Mir5122-201ENSMUST00000175004 89 ntBASIC19.4■□□□□ 0.7
Smad4P97471 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smad4P97471 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.4■□□□□ 0.7
Smad4P97471 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smad4P97471 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smad4P97471 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smad4P97471 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smad4P97471 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smad4P97471 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smad4P97471 Gm13158-201ENSMUST00000122007 736 ntBASIC19.39■□□□□ 0.69
Smad4P97471 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smad4P97471 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smad4P97471 Gm10819-201ENSMUST00000099988 561 ntBASIC19.39■□□□□ 0.69
Smad4P97471 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smad4P97471 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smad4P97471 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smad4P97471 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smad4P97471 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Smad4P97471 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Smad4P97471 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.38■□□□□ 0.69
Smad4P97471 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Smad4P97471 Gm21362-201ENSMUST00000194272 928 ntBASIC19.38■□□□□ 0.69
Smad4P97471 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smad4P97471 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smad4P97471 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smad4P97471 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smad4P97471 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Smad4P97471 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smad4P97471 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smad4P97471 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smad4P97471 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smad4P97471 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.37■□□□□ 0.69
Smad4P97471 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad4P97471 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad4P97471 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.36■□□□□ 0.69
Smad4P97471 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Smad4P97471 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.36■□□□□ 0.69
Smad4P97471 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad4P97471 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad4P97471 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smad4P97471 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smad4P97471 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smad4P97471 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad4P97471 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad4P97471 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad4P97471 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad4P97471 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smad4P97471 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.35■□□□□ 0.69
Smad4P97471 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smad4P97471 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad4P97471 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad4P97471 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad4P97471 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad4P97471 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smad4P97471 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad4P97471 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad4P97471 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.34■□□□□ 0.69
Smad4P97471 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad4P97471 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.34■□□□□ 0.69
Smad4P97471 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smad4P97471 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smad4P97471 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad4P97471 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad4P97471 Gm5417-201ENSMUST00000079706 384 ntBASIC19.34■□□□□ 0.69
Smad4P97471 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad4P97471 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smad4P97471 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Smad4P97471 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.33■□□□□ 0.68
Smad4P97471 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.33■□□□□ 0.68
Smad4P97471 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.33■□□□□ 0.68
Smad4P97471 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smad4P97471 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.33■□□□□ 0.68
Smad4P97471 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.33■□□□□ 0.68
Smad4P97471 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smad4P97471 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms