Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3f3aP84244 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.11■□□□□ 0.33
H3f3aP84244 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H3f3aP84244 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
H3f3aP84244 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H3f3aP84244 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H3f3aP84244 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H3f3aP84244 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.1■□□□□ 0.33
H3f3aP84244 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.1■□□□□ 0.33
H3f3aP84244 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H3f3aP84244 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H3f3aP84244 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
H3f3aP84244 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.1■□□□□ 0.33
H3f3aP84244 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H3f3aP84244 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H3f3aP84244 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H3f3aP84244 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H3f3aP84244 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H3f3aP84244 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H3f3aP84244 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.09■□□□□ 0.33
H3f3aP84244 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
H3f3aP84244 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
H3f3aP84244 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H3f3aP84244 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H3f3aP84244 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
H3f3aP84244 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H3f3aP84244 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
H3f3aP84244 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H3f3aP84244 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
H3f3aP84244 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H3f3aP84244 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H3f3aP84244 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
H3f3aP84244 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H3f3aP84244 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H3f3aP84244 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3f3aP84244 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3f3aP84244 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3f3aP84244 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
H3f3aP84244 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
H3f3aP84244 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.07■□□□□ 0.32
H3f3aP84244 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.07■□□□□ 0.32
H3f3aP84244 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.07■□□□□ 0.32
H3f3aP84244 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3f3aP84244 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3f3aP84244 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3f3aP84244 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
H3f3aP84244 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3f3aP84244 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H3f3aP84244 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
H3f3aP84244 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3f3aP84244 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
H3f3aP84244 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3f3aP84244 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.06■□□□□ 0.32
H3f3aP84244 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
H3f3aP84244 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3f3aP84244 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.06■□□□□ 0.32
H3f3aP84244 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.06■□□□□ 0.32
H3f3aP84244 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3f3aP84244 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.06■□□□□ 0.32
H3f3aP84244 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.06■□□□□ 0.32
H3f3aP84244 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3f3aP84244 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H3f3aP84244 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3f3aP84244 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.06■□□□□ 0.32
H3f3aP84244 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3f3aP84244 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H3f3aP84244 Iqck-206ENSMUST00000208658 2891 ntBASIC17.05■□□□□ 0.32
H3f3aP84244 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3f3aP84244 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
H3f3aP84244 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3f3aP84244 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3f3aP84244 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.05■□□□□ 0.32
H3f3aP84244 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.05■□□□□ 0.32
H3f3aP84244 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.05■□□□□ 0.32
H3f3aP84244 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3f3aP84244 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3f3aP84244 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.05■□□□□ 0.32
H3f3aP84244 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3f3aP84244 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H3f3aP84244 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
H3f3aP84244 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
H3f3aP84244 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3f3aP84244 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3f3aP84244 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
H3f3aP84244 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.04■□□□□ 0.32
H3f3aP84244 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.04■□□□□ 0.32
H3f3aP84244 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.04■□□□□ 0.32
H3f3aP84244 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.04■□□□□ 0.32
H3f3aP84244 Gm10493-201ENSMUST00000097270 612 ntBASIC17.04■□□□□ 0.32
H3f3aP84244 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3f3aP84244 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H3f3aP84244 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3f3aP84244 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H3f3aP84244 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H3f3aP84244 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3f3aP84244 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
H3f3aP84244 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3f3aP84244 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3f3aP84244 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
H3f3aP84244 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms