Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CiitaP79621 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CiitaP79621 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CiitaP79621 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CiitaP79621 Gm29257-201ENSMUST00000186115 639 ntBASIC20.9■□□□□ 0.94
CiitaP79621 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.9■□□□□ 0.94
CiitaP79621 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CiitaP79621 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.89■□□□□ 0.94
CiitaP79621 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CiitaP79621 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CiitaP79621 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CiitaP79621 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CiitaP79621 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CiitaP79621 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CiitaP79621 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CiitaP79621 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CiitaP79621 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CiitaP79621 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CiitaP79621 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CiitaP79621 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CiitaP79621 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CiitaP79621 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.88■□□□□ 0.93
CiitaP79621 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CiitaP79621 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CiitaP79621 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CiitaP79621 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CiitaP79621 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CiitaP79621 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CiitaP79621 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CiitaP79621 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CiitaP79621 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CiitaP79621 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CiitaP79621 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CiitaP79621 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CiitaP79621 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CiitaP79621 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CiitaP79621 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CiitaP79621 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CiitaP79621 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.87■□□□□ 0.93
CiitaP79621 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CiitaP79621 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CiitaP79621 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CiitaP79621 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CiitaP79621 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CiitaP79621 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CiitaP79621 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.86■□□□□ 0.93
CiitaP79621 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CiitaP79621 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CiitaP79621 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CiitaP79621 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CiitaP79621 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CiitaP79621 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CiitaP79621 Gm12933-201ENSMUST00000120203 872 ntBASIC20.85■□□□□ 0.93
CiitaP79621 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CiitaP79621 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CiitaP79621 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.85■□□□□ 0.93
CiitaP79621 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CiitaP79621 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CiitaP79621 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CiitaP79621 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.85■□□□□ 0.93
CiitaP79621 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CiitaP79621 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CiitaP79621 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.84■□□□□ 0.93
CiitaP79621 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CiitaP79621 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.84■□□□□ 0.93
CiitaP79621 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.84■□□□□ 0.93
CiitaP79621 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CiitaP79621 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CiitaP79621 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CiitaP79621 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CiitaP79621 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CiitaP79621 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CiitaP79621 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.83■□□□□ 0.93
CiitaP79621 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CiitaP79621 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CiitaP79621 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CiitaP79621 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CiitaP79621 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CiitaP79621 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CiitaP79621 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CiitaP79621 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CiitaP79621 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CiitaP79621 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CiitaP79621 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CiitaP79621 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CiitaP79621 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
CiitaP79621 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CiitaP79621 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.81■□□□□ 0.92
CiitaP79621 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CiitaP79621 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CiitaP79621 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CiitaP79621 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.81■□□□□ 0.92
CiitaP79621 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CiitaP79621 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.81■□□□□ 0.92
CiitaP79621 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CiitaP79621 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CiitaP79621 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CiitaP79621 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CiitaP79621 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CiitaP79621 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms