Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Six5P70178 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six5P70178 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Notumos-201ENSMUST00000151998 2659 ntBASIC17.93■□□□□ 0.46
Six5P70178 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.93■□□□□ 0.46
Six5P70178 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.93■□□□□ 0.46
Six5P70178 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Six5P70178 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Six5P70178 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six5P70178 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Six5P70178 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six5P70178 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six5P70178 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Six5P70178 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six5P70178 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.92■□□□□ 0.46
Six5P70178 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six5P70178 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six5P70178 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six5P70178 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.92■□□□□ 0.46
Six5P70178 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Six5P70178 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.92■□□□□ 0.46
Six5P70178 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
Six5P70178 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six5P70178 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six5P70178 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six5P70178 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six5P70178 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six5P70178 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Six5P70178 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Six5P70178 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.91■□□□□ 0.46
Six5P70178 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six5P70178 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.91■□□□□ 0.46
Six5P70178 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Six5P70178 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
Six5P70178 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.91■□□□□ 0.46
Six5P70178 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six5P70178 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six5P70178 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six5P70178 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six5P70178 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six5P70178 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six5P70178 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six5P70178 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six5P70178 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six5P70178 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six5P70178 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six5P70178 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Six5P70178 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.9■□□□□ 0.46
Six5P70178 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six5P70178 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six5P70178 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six5P70178 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Six5P70178 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Six5P70178 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Six5P70178 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Six5P70178 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six5P70178 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Six5P70178 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Six5P70178 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.89■□□□□ 0.45
Six5P70178 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Six5P70178 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six5P70178 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six5P70178 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.89■□□□□ 0.45
Six5P70178 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six5P70178 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six5P70178 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six5P70178 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Six5P70178 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Six5P70178 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.88■□□□□ 0.45
Six5P70178 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six5P70178 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six5P70178 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six5P70178 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six5P70178 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Six5P70178 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six5P70178 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six5P70178 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Six5P70178 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms