Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm5075-201ENSMUST00000196916 622 ntBASIC19.77■□□□□ 0.76
Ybx1P62960 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ybx1P62960 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.77■□□□□ 0.76
Ybx1P62960 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.77■□□□□ 0.76
Ybx1P62960 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ybx1P62960 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ybx1P62960 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ybx1P62960 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Ybx1P62960 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.76■□□□□ 0.75
Ybx1P62960 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ybx1P62960 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ybx1P62960 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.76■□□□□ 0.75
Ybx1P62960 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ybx1P62960 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ybx1P62960 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ybx1P62960 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.75■□□□□ 0.75
Ybx1P62960 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ybx1P62960 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ybx1P62960 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ybx1P62960 Gm22240-201ENSMUST00000175225 82 ntBASIC19.75■□□□□ 0.75
Ybx1P62960 Gm20760-201ENSMUST00000179197 648 ntBASIC19.75■□□□□ 0.75
Ybx1P62960 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ybx1P62960 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ybx1P62960 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ybx1P62960 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.75■□□□□ 0.75
Ybx1P62960 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ybx1P62960 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ybx1P62960 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ybx1P62960 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ybx1P62960 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ybx1P62960 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Ybx1P62960 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ybx1P62960 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ybx1P62960 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.73■□□□□ 0.75
Ybx1P62960 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ybx1P62960 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.73■□□□□ 0.75
Ybx1P62960 Gm6211-202ENSMUST00000167849 925 ntBASIC19.73■□□□□ 0.75
Ybx1P62960 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.73■□□□□ 0.75
Ybx1P62960 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ybx1P62960 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ybx1P62960 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ybx1P62960 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ybx1P62960 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ybx1P62960 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ybx1P62960 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Ybx1P62960 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ybx1P62960 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.72■□□□□ 0.75
Ybx1P62960 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ybx1P62960 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ybx1P62960 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Ybx1P62960 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ybx1P62960 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ybx1P62960 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ybx1P62960 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.71■□□□□ 0.75
Ybx1P62960 Gm20049-201ENSMUST00000219950 730 ntBASIC19.71■□□□□ 0.75
Ybx1P62960 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ybx1P62960 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ybx1P62960 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ybx1P62960 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ybx1P62960 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
Ybx1P62960 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ybx1P62960 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ybx1P62960 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ybx1P62960 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ybx1P62960 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ybx1P62960 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ybx1P62960 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ybx1P62960 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ybx1P62960 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ybx1P62960 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ybx1P62960 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ybx1P62960 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ybx1P62960 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ybx1P62960 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.69■□□□□ 0.74
Ybx1P62960 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ybx1P62960 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ybx1P62960 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ybx1P62960 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ybx1P62960 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Ybx1P62960 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ybx1P62960 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ybx1P62960 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ybx1P62960 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ybx1P62960 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ybx1P62960 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ybx1P62960 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms