Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.16■□□□□ 0.02
Rab4aP56371 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab4aP56371 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab4aP56371 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rab4aP56371 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab4aP56371 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab4aP56371 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab4aP56371 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab4aP56371 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab4aP56371 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rab4aP56371 Gm8503-201ENSMUST00000118131 455 ntBASIC15.15■□□□□ 0.02
Rab4aP56371 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.15■□□□□ 0.02
Rab4aP56371 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab4aP56371 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab4aP56371 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab4aP56371 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab4aP56371 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rab4aP56371 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Rab4aP56371 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rab4aP56371 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.14■□□□□ 0.01
Rab4aP56371 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.14■□□□□ 0.01
Rab4aP56371 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rab4aP56371 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.14■□□□□ 0.01
Rab4aP56371 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Rab4aP56371 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Rab4aP56371 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rab4aP56371 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rab4aP56371 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab4aP56371 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rab4aP56371 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.14■□□□□ 0.01
Rab4aP56371 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rab4aP56371 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rab4aP56371 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rab4aP56371 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.13■□□□□ 0.01
Rab4aP56371 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.12■□□□□ 0.01
Rab4aP56371 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rab4aP56371 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.12■□□□□ 0.01
Rab4aP56371 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab4aP56371 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.12■□□□□ 0.01
Rab4aP56371 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab4aP56371 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rab4aP56371 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.11■□□□□ 0.01
Rab4aP56371 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rab4aP56371 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab4aP56371 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rab4aP56371 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rab4aP56371 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab4aP56371 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab4aP56371 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab4aP56371 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rab4aP56371 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab4aP56371 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rab4aP56371 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab4aP56371 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.11■□□□□ 0.01
Rab4aP56371 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms