Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.79■□□□□ 0.12
Hist1h1aP43275 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hist1h1aP43275 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Hist1h1aP43275 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hist1h1aP43275 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.79■□□□□ 0.12
Hist1h1aP43275 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hist1h1aP43275 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hist1h1aP43275 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hist1h1aP43275 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hist1h1aP43275 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.79■□□□□ 0.12
Hist1h1aP43275 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hist1h1aP43275 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hist1h1aP43275 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hist1h1aP43275 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hist1h1aP43275 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hist1h1aP43275 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Hist1h1aP43275 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hist1h1aP43275 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hist1h1aP43275 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hist1h1aP43275 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hist1h1aP43275 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hist1h1aP43275 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hist1h1aP43275 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Hist1h1aP43275 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hist1h1aP43275 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.77■□□□□ 0.12
Hist1h1aP43275 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hist1h1aP43275 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hist1h1aP43275 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.77■□□□□ 0.11
Hist1h1aP43275 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hist1h1aP43275 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.77■□□□□ 0.11
Hist1h1aP43275 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Hist1h1aP43275 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hist1h1aP43275 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Gm22238-201ENSMUST00000175222 88 ntBASIC15.76■□□□□ 0.11
Hist1h1aP43275 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Gm9959-201ENSMUST00000068277 390 ntBASIC15.76■□□□□ 0.11
Hist1h1aP43275 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.76■□□□□ 0.11
Hist1h1aP43275 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hist1h1aP43275 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.75■□□□□ 0.11
Hist1h1aP43275 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hist1h1aP43275 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hist1h1aP43275 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hist1h1aP43275 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hist1h1aP43275 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.73■□□□□ 0.11
Hist1h1aP43275 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms