Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-2P42586 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.65■□□□□ 0.42
Nkx2-2P42586 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.65■□□□□ 0.42
Nkx2-2P42586 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nkx2-2P42586 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-2P42586 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Nkx2-2P42586 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-2P42586 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-2P42586 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-2P42586 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx2-2P42586 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Nkx2-2P42586 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-2P42586 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-2P42586 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.63■□□□□ 0.41
Nkx2-2P42586 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-2P42586 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.63■□□□□ 0.41
Nkx2-2P42586 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.63■□□□□ 0.41
Nkx2-2P42586 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.63■□□□□ 0.41
Nkx2-2P42586 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-2P42586 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-2P42586 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-2P42586 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-2P42586 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-2P42586 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-2P42586 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-2P42586 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-2P42586 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-2P42586 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-2P42586 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-2P42586 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-2P42586 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-2P42586 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nkx2-2P42586 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nkx2-2P42586 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-2P42586 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-2P42586 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Nkx2-2P42586 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-2P42586 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.6■□□□□ 0.41
Nkx2-2P42586 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-2P42586 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-2P42586 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-2P42586 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-2P42586 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-2P42586 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nkx2-2P42586 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-2P42586 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-2P42586 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-2P42586 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-2P42586 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-2P42586 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Nkx2-2P42586 Gm7860-201ENSMUST00000121190 879 ntBASIC17.59■□□□□ 0.41
Nkx2-2P42586 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-2P42586 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-2P42586 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nkx2-2P42586 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.59■□□□□ 0.41
Nkx2-2P42586 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-2P42586 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-2P42586 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-2P42586 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-2P42586 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-2P42586 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-2P42586 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-2P42586 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nkx2-2P42586 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.58■□□□□ 0.4
Nkx2-2P42586 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.58■□□□□ 0.4
Nkx2-2P42586 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.58■□□□□ 0.4
Nkx2-2P42586 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Nkx2-2P42586 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Nkx2-2P42586 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
Nkx2-2P42586 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.58■□□□□ 0.4
Nkx2-2P42586 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-2P42586 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-2P42586 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-2P42586 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms