Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsf9P41274 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsf9P41274 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.39■□□□□ 0.53
Tnfsf9P41274 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.39■□□□□ 0.53
Tnfsf9P41274 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsf9P41274 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsf9P41274 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsf9P41274 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsf9P41274 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfsf9P41274 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.38■□□□□ 0.53
Tnfsf9P41274 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsf9P41274 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsf9P41274 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsf9P41274 Gm38205-201ENSMUST00000192243 258 ntBASIC18.37■□□□□ 0.53
Tnfsf9P41274 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsf9P41274 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsf9P41274 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.37■□□□□ 0.53
Tnfsf9P41274 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tnfsf9P41274 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsf9P41274 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsf9P41274 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfsf9P41274 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tnfsf9P41274 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfsf9P41274 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfsf9P41274 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfsf9P41274 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.36■□□□□ 0.53
Tnfsf9P41274 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfsf9P41274 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsf9P41274 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsf9P41274 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tnfsf9P41274 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tnfsf9P41274 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsf9P41274 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tnfsf9P41274 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.35■□□□□ 0.53
Tnfsf9P41274 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsf9P41274 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tnfsf9P41274 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsf9P41274 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tnfsf9P41274 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.34■□□□□ 0.53
Tnfsf9P41274 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.34■□□□□ 0.53
Tnfsf9P41274 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsf9P41274 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsf9P41274 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.34■□□□□ 0.53
Tnfsf9P41274 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.34■□□□□ 0.53
Tnfsf9P41274 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.34■□□□□ 0.53
Tnfsf9P41274 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsf9P41274 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Tnfsf9P41274 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.33■□□□□ 0.53
Tnfsf9P41274 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Tnfsf9P41274 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Tnfsf9P41274 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Tnfsf9P41274 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfsf9P41274 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.33■□□□□ 0.52
Tnfsf9P41274 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfsf9P41274 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfsf9P41274 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfsf9P41274 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfsf9P41274 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfsf9P41274 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfsf9P41274 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfsf9P41274 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfsf9P41274 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfsf9P41274 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfsf9P41274 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Tnfsf9P41274 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Gm10602-201ENSMUST00000098239 609 ntBASIC18.31■□□□□ 0.52
Tnfsf9P41274 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsf9P41274 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tnfsf9P41274 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfsf9P41274 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfsf9P41274 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.3■□□□□ 0.52
Tnfsf9P41274 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfsf9P41274 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfsf9P41274 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfsf9P41274 Gm13146-201ENSMUST00000118508 780 ntBASIC18.3■□□□□ 0.52
Tnfsf9P41274 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tnfsf9P41274 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.3■□□□□ 0.52
Tnfsf9P41274 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms