Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.07■□□□□ 0.64
LdlrP35951 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LdlrP35951 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
LdlrP35951 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LdlrP35951 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LdlrP35951 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LdlrP35951 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.07■□□□□ 0.64
LdlrP35951 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LdlrP35951 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LdlrP35951 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LdlrP35951 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
LdlrP35951 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
LdlrP35951 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LdlrP35951 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LdlrP35951 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LdlrP35951 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LdlrP35951 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
LdlrP35951 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LdlrP35951 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LdlrP35951 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LdlrP35951 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LdlrP35951 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LdlrP35951 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LdlrP35951 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LdlrP35951 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LdlrP35951 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LdlrP35951 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LdlrP35951 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LdlrP35951 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LdlrP35951 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LdlrP35951 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.05■□□□□ 0.64
LdlrP35951 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LdlrP35951 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.05■□□□□ 0.64
LdlrP35951 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LdlrP35951 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LdlrP35951 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LdlrP35951 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LdlrP35951 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LdlrP35951 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.05■□□□□ 0.64
LdlrP35951 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LdlrP35951 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LdlrP35951 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LdlrP35951 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LdlrP35951 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.04■□□□□ 0.64
LdlrP35951 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LdlrP35951 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.04■□□□□ 0.64
LdlrP35951 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.04■□□□□ 0.64
LdlrP35951 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LdlrP35951 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LdlrP35951 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LdlrP35951 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LdlrP35951 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LdlrP35951 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LdlrP35951 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LdlrP35951 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LdlrP35951 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LdlrP35951 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LdlrP35951 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.03■□□□□ 0.64
LdlrP35951 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LdlrP35951 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LdlrP35951 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LdlrP35951 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LdlrP35951 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LdlrP35951 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.02■□□□□ 0.64
LdlrP35951 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LdlrP35951 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
LdlrP35951 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LdlrP35951 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LdlrP35951 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
LdlrP35951 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LdlrP35951 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
LdlrP35951 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LdlrP35951 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.01■□□□□ 0.63
LdlrP35951 BC021767-201ENSMUST00000126387 1716 ntBASIC19.01■□□□□ 0.63
LdlrP35951 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.01■□□□□ 0.63
LdlrP35951 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LdlrP35951 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LdlrP35951 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LdlrP35951 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LdlrP35951 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19■□□□□ 0.63
LdlrP35951 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LdlrP35951 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LdlrP35951 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LdlrP35951 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LdlrP35951 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19■□□□□ 0.63
LdlrP35951 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19■□□□□ 0.63
LdlrP35951 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LdlrP35951 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19■□□□□ 0.63
LdlrP35951 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms