Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp3P28862 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.67■□□□□ 0.9
Mmp3P28862 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp3P28862 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp3P28862 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.66■□□□□ 0.9
Mmp3P28862 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp3P28862 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp3P28862 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp3P28862 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp3P28862 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp3P28862 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.66■□□□□ 0.9
Mmp3P28862 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp3P28862 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp3P28862 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp3P28862 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp3P28862 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp3P28862 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.65■□□□□ 0.9
Mmp3P28862 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp3P28862 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp3P28862 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp3P28862 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mmp3P28862 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp3P28862 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.65■□□□□ 0.9
Mmp3P28862 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp3P28862 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp3P28862 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp3P28862 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mmp3P28862 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Mmp3P28862 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Mmp3P28862 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Mmp3P28862 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp3P28862 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp3P28862 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp3P28862 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp3P28862 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp3P28862 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp3P28862 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Mmp3P28862 Gm12441-201ENSMUST00000121806 588 ntBASIC20.64■□□□□ 0.89
Mmp3P28862 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp3P28862 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.64■□□□□ 0.89
Mmp3P28862 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.64■□□□□ 0.89
Mmp3P28862 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp3P28862 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp3P28862 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp3P28862 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.64■□□□□ 0.89
Mmp3P28862 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp3P28862 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
Mmp3P28862 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Mmp3P28862 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp3P28862 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.63■□□□□ 0.89
Mmp3P28862 Gm4968-201ENSMUST00000071458 858 ntBASIC20.63■□□□□ 0.89
Mmp3P28862 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Mmp3P28862 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp3P28862 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp3P28862 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp3P28862 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp3P28862 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Mmp3P28862 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.62■□□□□ 0.89
Mmp3P28862 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.62■□□□□ 0.89
Mmp3P28862 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp3P28862 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp3P28862 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp3P28862 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp3P28862 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp3P28862 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp3P28862 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Mmp3P28862 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp3P28862 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp3P28862 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp3P28862 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.61■□□□□ 0.89
Mmp3P28862 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.61■□□□□ 0.89
Mmp3P28862 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp3P28862 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Mmp3P28862 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp3P28862 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp3P28862 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp3P28862 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.6■□□□□ 0.89
Mmp3P28862 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp3P28862 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp3P28862 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Mmp3P28862 Gm6211-202ENSMUST00000167849 925 ntBASIC20.6■□□□□ 0.89
Mmp3P28862 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.6■□□□□ 0.89
Mmp3P28862 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp3P28862 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp3P28862 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp3P28862 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp3P28862 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.6■□□□□ 0.89
Mmp3P28862 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp3P28862 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Mmp3P28862 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp3P28862 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Mmp3P28862 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp3P28862 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp3P28862 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp3P28862 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.59■□□□□ 0.89
Mmp3P28862 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Mmp3P28862 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp3P28862 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp3P28862 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp3P28862 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms