Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cd40P27512 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40P27512 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.4■□□□□ 0.38
Cd40P27512 Golph3-202ENSMUST00000226517 2359 ntBASIC17.4■□□□□ 0.38
Cd40P27512 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cd40P27512 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40P27512 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40P27512 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Cd40P27512 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.39■□□□□ 0.37
Cd40P27512 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.39■□□□□ 0.37
Cd40P27512 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.39■□□□□ 0.37
Cd40P27512 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.39■□□□□ 0.37
Cd40P27512 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cd40P27512 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40P27512 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40P27512 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cd40P27512 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd40P27512 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40P27512 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40P27512 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Cd40P27512 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Cd40P27512 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.38■□□□□ 0.37
Cd40P27512 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40P27512 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cd40P27512 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd40P27512 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd40P27512 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cd40P27512 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd40P27512 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cd40P27512 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.37■□□□□ 0.37
Cd40P27512 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.37■□□□□ 0.37
Cd40P27512 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd40P27512 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd40P27512 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cd40P27512 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd40P27512 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Cd40P27512 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40P27512 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40P27512 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cd40P27512 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.36■□□□□ 0.37
Cd40P27512 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40P27512 Gm7860-201ENSMUST00000121190 879 ntBASIC17.36■□□□□ 0.37
Cd40P27512 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40P27512 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.36■□□□□ 0.37
Cd40P27512 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40P27512 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40P27512 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40P27512 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.36■□□□□ 0.37
Cd40P27512 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40P27512 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40P27512 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40P27512 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40P27512 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40P27512 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40P27512 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40P27512 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40P27512 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.35■□□□□ 0.37
Cd40P27512 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40P27512 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.35■□□□□ 0.37
Cd40P27512 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40P27512 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.35■□□□□ 0.37
Cd40P27512 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cd40P27512 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cd40P27512 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40P27512 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40P27512 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40P27512 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cd40P27512 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Cd40P27512 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd40P27512 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd40P27512 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cd40P27512 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cd40P27512 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd40P27512 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd40P27512 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd40P27512 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd40P27512 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd40P27512 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cd40P27512 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cd40P27512 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd40P27512 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.33■□□□□ 0.37
Cd40P27512 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cd40P27512 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd40P27512 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd40P27512 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd40P27512 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cd40P27512 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd40P27512 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cd40P27512 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms