Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1bP25119 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1bP25119 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1bP25119 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1bP25119 Gm9988-201ENSMUST00000069786 435 ntBASIC17.78■□□□□ 0.44
Tnfrsf1bP25119 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1bP25119 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1bP25119 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1bP25119 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1bP25119 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 Gm10493-201ENSMUST00000097270 612 ntBASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1bP25119 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tnfrsf1bP25119 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tnfrsf1bP25119 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Gm18284-201ENSMUST00000172604 624 ntBASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Gm5874-201ENSMUST00000096101 508 ntBASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1bP25119 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1bP25119 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf1bP25119 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Tnfrsf1bP25119 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf1bP25119 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Tnfrsf1bP25119 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf1bP25119 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Tnfrsf1bP25119 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf1bP25119 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf1bP25119 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms