Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pde6bP23440 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pde6bP23440 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Pde6bP23440 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6bP23440 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6bP23440 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6bP23440 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6bP23440 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pde6bP23440 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6bP23440 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6bP23440 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.85■□□□□ 0.93
Pde6bP23440 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6bP23440 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.85■□□□□ 0.93
Pde6bP23440 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6bP23440 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6bP23440 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6bP23440 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6bP23440 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pde6bP23440 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 AA386476-201ENSMUST00000098781 1665 ntBASIC20.84■□□□□ 0.93
Pde6bP23440 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.84■□□□□ 0.93
Pde6bP23440 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.84■□□□□ 0.93
Pde6bP23440 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pde6bP23440 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pde6bP23440 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pde6bP23440 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6bP23440 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pde6bP23440 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pde6bP23440 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.83■□□□□ 0.93
Pde6bP23440 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pde6bP23440 Gm38205-201ENSMUST00000192243 258 ntBASIC20.83■□□□□ 0.93
Pde6bP23440 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.83■□□□□ 0.93
Pde6bP23440 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.83■□□□□ 0.93
Pde6bP23440 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pde6bP23440 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.83■□□□□ 0.92
Pde6bP23440 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Pde6bP23440 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pde6bP23440 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6bP23440 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6bP23440 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6bP23440 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6bP23440 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.82■□□□□ 0.92
Pde6bP23440 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.82■□□□□ 0.92
Pde6bP23440 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6bP23440 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6bP23440 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Pde6bP23440 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6bP23440 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6bP23440 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.81■□□□□ 0.92
Pde6bP23440 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6bP23440 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Pde6bP23440 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.81■□□□□ 0.92
Pde6bP23440 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6bP23440 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6bP23440 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pde6bP23440 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.81■□□□□ 0.92
Pde6bP23440 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6bP23440 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6bP23440 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Pde6bP23440 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pde6bP23440 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6bP23440 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.8■□□□□ 0.92
Pde6bP23440 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6bP23440 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6bP23440 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.8■□□□□ 0.92
Pde6bP23440 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6bP23440 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6bP23440 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
Pde6bP23440 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6bP23440 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6bP23440 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pde6bP23440 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6bP23440 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pde6bP23440 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6bP23440 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6bP23440 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms