Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.84■□□□□ 0.61
Srp54P14576 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srp54P14576 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srp54P14576 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Srp54P14576 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Srp54P14576 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srp54P14576 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srp54P14576 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srp54P14576 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Srp54P14576 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srp54P14576 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srp54P14576 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Srp54P14576 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srp54P14576 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srp54P14576 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Srp54P14576 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.82■□□□□ 0.6
Srp54P14576 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Srp54P14576 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Srp54P14576 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54P14576 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Srp54P14576 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Srp54P14576 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Srp54P14576 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54P14576 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.81■□□□□ 0.6
Srp54P14576 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54P14576 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.81■□□□□ 0.6
Srp54P14576 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54P14576 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54P14576 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.8■□□□□ 0.6
Srp54P14576 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Srp54P14576 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srp54P14576 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Srp54P14576 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srp54P14576 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Srp54P14576 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.8■□□□□ 0.6
Srp54P14576 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srp54P14576 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54P14576 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54P14576 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Srp54P14576 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54P14576 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54P14576 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54P14576 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54P14576 Gm38205-201ENSMUST00000192243 258 ntBASIC18.79■□□□□ 0.6
Srp54P14576 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.79■□□□□ 0.6
Srp54P14576 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.79■□□□□ 0.6
Srp54P14576 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54P14576 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Srp54P14576 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54P14576 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Srp54P14576 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Srp54P14576 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Srp54P14576 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54P14576 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srp54P14576 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srp54P14576 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srp54P14576 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srp54P14576 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Srp54P14576 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Srp54P14576 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Srp54P14576 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srp54P14576 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srp54P14576 Gm10602-201ENSMUST00000098239 609 ntBASIC18.77■□□□□ 0.6
Srp54P14576 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Srp54P14576 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Srp54P14576 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54P14576 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54P14576 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54P14576 Gm13146-201ENSMUST00000118508 780 ntBASIC18.76■□□□□ 0.59
Srp54P14576 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54P14576 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54P14576 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54P14576 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54P14576 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54P14576 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms