Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PtcraP0C6B2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PtcraP0C6B2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PtcraP0C6B2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PtcraP0C6B2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PtcraP0C6B2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PtcraP0C6B2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PtcraP0C6B2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PtcraP0C6B2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PtcraP0C6B2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PtcraP0C6B2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PtcraP0C6B2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PtcraP0C6B2 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.68■□□□□ 0.26
PtcraP0C6B2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PtcraP0C6B2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PtcraP0C6B2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PtcraP0C6B2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PtcraP0C6B2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PtcraP0C6B2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.67■□□□□ 0.26
PtcraP0C6B2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
PtcraP0C6B2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PtcraP0C6B2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.67■□□□□ 0.26
PtcraP0C6B2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PtcraP0C6B2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PtcraP0C6B2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PtcraP0C6B2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.67■□□□□ 0.26
PtcraP0C6B2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.67■□□□□ 0.26
PtcraP0C6B2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.67■□□□□ 0.26
PtcraP0C6B2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PtcraP0C6B2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
PtcraP0C6B2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtcraP0C6B2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtcraP0C6B2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.65■□□□□ 0.26
PtcraP0C6B2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PtcraP0C6B2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.65■□□□□ 0.26
PtcraP0C6B2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PtcraP0C6B2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtcraP0C6B2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.65■□□□□ 0.26
PtcraP0C6B2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PtcraP0C6B2 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.65■□□□□ 0.26
PtcraP0C6B2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtcraP0C6B2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PtcraP0C6B2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
PtcraP0C6B2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PtcraP0C6B2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtcraP0C6B2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PtcraP0C6B2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.63■□□□□ 0.25
PtcraP0C6B2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms