Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Polr2aP08775 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Polr2aP08775 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Polr2aP08775 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Polr2aP08775 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Polr2aP08775 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Polr2aP08775 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Polr2aP08775 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Polr2aP08775 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
Polr2aP08775 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Polr2aP08775 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Polr2aP08775 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Polr2aP08775 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.27■■□□□ 1.15
Polr2aP08775 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Polr2aP08775 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC22.27■■□□□ 1.15
Polr2aP08775 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Polr2aP08775 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Polr2aP08775 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Polr2aP08775 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Polr2aP08775 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Polr2aP08775 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Polr2aP08775 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Polr2aP08775 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Polr2aP08775 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
Polr2aP08775 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
Polr2aP08775 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC22.25■■□□□ 1.15
Polr2aP08775 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC22.25■■□□□ 1.15
Polr2aP08775 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Polr2aP08775 CT010444.2-201ENSMUST00000217877 1629 ntBASIC22.25■■□□□ 1.15
Polr2aP08775 Gm11249-201ENSMUST00000117071 859 ntBASIC22.25■■□□□ 1.15
Polr2aP08775 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC22.25■■□□□ 1.15
Polr2aP08775 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Polr2aP08775 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Polr2aP08775 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Polr2aP08775 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Polr2aP08775 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Polr2aP08775 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.24■■□□□ 1.15
Polr2aP08775 Gm15847-201ENSMUST00000121417 1065 ntBASIC22.24■■□□□ 1.15
Polr2aP08775 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Polr2aP08775 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Polr2aP08775 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.24■■□□□ 1.15
Polr2aP08775 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Polr2aP08775 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.24■■□□□ 1.15
Polr2aP08775 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Polr2aP08775 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.24■■□□□ 1.15
Polr2aP08775 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Polr2aP08775 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC22.23■■□□□ 1.15
Polr2aP08775 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC22.23■■□□□ 1.15
Polr2aP08775 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Polr2aP08775 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Polr2aP08775 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Polr2aP08775 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Polr2aP08775 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Polr2aP08775 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Polr2aP08775 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Polr2aP08775 Gm11643-201ENSMUST00000119578 864 ntBASIC22.22■■□□□ 1.15
Polr2aP08775 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Polr2aP08775 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.22■■□□□ 1.15
Polr2aP08775 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Polr2aP08775 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Polr2aP08775 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Polr2aP08775 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.21■■□□□ 1.15
Polr2aP08775 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Polr2aP08775 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.21■■□□□ 1.15
Polr2aP08775 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Polr2aP08775 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Polr2aP08775 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Polr2aP08775 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Polr2aP08775 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Polr2aP08775 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Polr2aP08775 Mir5122-201ENSMUST00000175004 89 ntBASIC22.2■■□□□ 1.14
Polr2aP08775 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Polr2aP08775 Gm2399-201ENSMUST00000104944 225 ntBASIC22.19■■□□□ 1.14
Polr2aP08775 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Polr2aP08775 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.19■■□□□ 1.14
Polr2aP08775 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Polr2aP08775 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.19■■□□□ 1.14
Polr2aP08775 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
Polr2aP08775 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Polr2aP08775 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.19■■□□□ 1.14
Polr2aP08775 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Polr2aP08775 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Polr2aP08775 Nrn1-203ENSMUST00000223611 1443 ntBASIC22.19■■□□□ 1.14
Polr2aP08775 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Polr2aP08775 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Polr2aP08775 Gm9987-201ENSMUST00000069768 567 ntBASIC22.18■■□□□ 1.14
Polr2aP08775 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Polr2aP08775 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Polr2aP08775 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
Polr2aP08775 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
Polr2aP08775 Gm13158-201ENSMUST00000122007 736 ntBASIC22.18■■□□□ 1.14
Polr2aP08775 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.18■■□□□ 1.14
Polr2aP08775 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Polr2aP08775 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Polr2aP08775 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Polr2aP08775 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Polr2aP08775 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Polr2aP08775 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Polr2aP08775 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Polr2aP08775 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms