Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04224 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04224 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P04224 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P04224 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
P04224 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04224 Cap2-205ENSMUST00000225824 1634 ntBASIC16.81■□□□□ 0.28
P04224 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P04224 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.8■□□□□ 0.28
P04224 Grk6-206ENSMUST00000224995 2971 ntBASIC16.8■□□□□ 0.28
P04224 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.8■□□□□ 0.28
P04224 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.8■□□□□ 0.28
P04224 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04224 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
P04224 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.79■□□□□ 0.28
P04224 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.79■□□□□ 0.28
P04224 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04224 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
P04224 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
P04224 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.78■□□□□ 0.28
P04224 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
P04224 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.78■□□□□ 0.28
P04224 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.78■□□□□ 0.28
P04224 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
P04224 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
P04224 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04224 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
P04224 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
P04224 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P04224 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P04224 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P04224 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P04224 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P04224 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.77■□□□□ 0.28
P04224 Gm10399-202ENSMUST00000202768 748 ntBASIC16.77■□□□□ 0.28
P04224 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
P04224 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P04224 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P04224 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
P04224 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.77■□□□□ 0.27
P04224 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
P04224 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
P04224 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
P04224 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
P04224 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
P04224 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
P04224 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
P04224 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.76■□□□□ 0.27
P04224 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P04224 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
P04224 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P04224 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P04224 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P04224 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
P04224 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P04224 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
P04224 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
P04224 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
P04224 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
P04224 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.75■□□□□ 0.27
P04224 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms