Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vti1aO89116 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Vti1aO89116 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vti1aO89116 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vti1aO89116 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vti1aO89116 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.7■□□□□ 0.9
Vti1aO89116 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vti1aO89116 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.7■□□□□ 0.9
Vti1aO89116 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vti1aO89116 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vti1aO89116 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vti1aO89116 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vti1aO89116 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vti1aO89116 Gm12933-201ENSMUST00000120203 872 ntBASIC20.69■□□□□ 0.9
Vti1aO89116 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.69■□□□□ 0.9
Vti1aO89116 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Vti1aO89116 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vti1aO89116 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1aO89116 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1aO89116 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vti1aO89116 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1aO89116 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1aO89116 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1aO89116 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1aO89116 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.68■□□□□ 0.9
Vti1aO89116 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1aO89116 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1aO89116 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vti1aO89116 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vti1aO89116 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vti1aO89116 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1aO89116 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1aO89116 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1aO89116 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1aO89116 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1aO89116 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.67■□□□□ 0.9
Vti1aO89116 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1aO89116 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vti1aO89116 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1aO89116 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1aO89116 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1aO89116 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vti1aO89116 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vti1aO89116 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vti1aO89116 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vti1aO89116 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.66■□□□□ 0.9
Vti1aO89116 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.66■□□□□ 0.9
Vti1aO89116 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vti1aO89116 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Vti1aO89116 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vti1aO89116 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.66■□□□□ 0.9
Vti1aO89116 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vti1aO89116 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vti1aO89116 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vti1aO89116 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vti1aO89116 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vti1aO89116 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vti1aO89116 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Vti1aO89116 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vti1aO89116 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.65■□□□□ 0.9
Vti1aO89116 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Vti1aO89116 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vti1aO89116 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vti1aO89116 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Vti1aO89116 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vti1aO89116 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.64■□□□□ 0.89
Vti1aO89116 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.64■□□□□ 0.89
Vti1aO89116 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Vti1aO89116 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.64■□□□□ 0.89
Vti1aO89116 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vti1aO89116 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vti1aO89116 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vti1aO89116 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1aO89116 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1aO89116 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1aO89116 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1aO89116 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1aO89116 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1aO89116 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.63■□□□□ 0.89
Vti1aO89116 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.63■□□□□ 0.89
Vti1aO89116 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1aO89116 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1aO89116 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.63■□□□□ 0.89
Vti1aO89116 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1aO89116 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vti1aO89116 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.63■□□□□ 0.89
Vti1aO89116 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vti1aO89116 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vti1aO89116 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vti1aO89116 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.62■□□□□ 0.89
Vti1aO89116 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.62■□□□□ 0.89
Vti1aO89116 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Vti1aO89116 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.62■□□□□ 0.89
Vti1aO89116 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vti1aO89116 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vti1aO89116 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vti1aO89116 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Vti1aO89116 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.61■□□□□ 0.89
Vti1aO89116 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Vti1aO89116 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms