Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hdac3O88895 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac3O88895 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac3O88895 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac3O88895 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac3O88895 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac3O88895 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hdac3O88895 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac3O88895 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac3O88895 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac3O88895 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac3O88895 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac3O88895 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac3O88895 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac3O88895 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac3O88895 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.06■□□□□ 0.32
Hdac3O88895 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hdac3O88895 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac3O88895 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac3O88895 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac3O88895 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac3O88895 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.06■□□□□ 0.32
Hdac3O88895 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac3O88895 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac3O88895 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac3O88895 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac3O88895 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.06■□□□□ 0.32
Hdac3O88895 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac3O88895 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac3O88895 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac3O88895 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac3O88895 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac3O88895 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac3O88895 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hdac3O88895 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hdac3O88895 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac3O88895 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.05■□□□□ 0.32
Hdac3O88895 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac3O88895 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac3O88895 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hdac3O88895 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Hdac3O88895 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Hdac3O88895 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac3O88895 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.05■□□□□ 0.32
Hdac3O88895 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac3O88895 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac3O88895 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac3O88895 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.04■□□□□ 0.32
Hdac3O88895 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac3O88895 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.04■□□□□ 0.32
Hdac3O88895 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac3O88895 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac3O88895 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac3O88895 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hdac3O88895 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac3O88895 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac3O88895 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hdac3O88895 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hdac3O88895 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.03■□□□□ 0.32
Hdac3O88895 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Gm43137-201ENSMUST00000198052 594 ntBASIC17.03■□□□□ 0.32
Hdac3O88895 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac3O88895 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Hdac3O88895 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac3O88895 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac3O88895 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hdac3O88895 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.02■□□□□ 0.32
Hdac3O88895 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.02■□□□□ 0.32
Hdac3O88895 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac3O88895 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac3O88895 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hdac3O88895 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Hdac3O88895 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Hdac3O88895 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms