Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Sh2d1aO88890 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh2d1aO88890 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh2d1aO88890 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sh2d1aO88890 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh2d1aO88890 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Sh2d1aO88890 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh2d1aO88890 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh2d1aO88890 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.52□□□□□ -0.25
Sh2d1aO88890 AA386476-201ENSMUST00000098781 1665 ntBASIC13.52□□□□□ -0.25
Sh2d1aO88890 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sh2d1aO88890 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh2d1aO88890 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sh2d1aO88890 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh2d1aO88890 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.5□□□□□ -0.25
Sh2d1aO88890 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Gm43137-201ENSMUST00000198052 594 ntBASIC13.5□□□□□ -0.25
Sh2d1aO88890 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh2d1aO88890 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Gm21956-201ENSMUST00000179946 522 ntBASIC13.49□□□□□ -0.25
Sh2d1aO88890 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sh2d1aO88890 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh2d1aO88890 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.48□□□□□ -0.25
Sh2d1aO88890 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sh2d1aO88890 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh2d1aO88890 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.48□□□□□ -0.25
Sh2d1aO88890 Gm13241-201ENSMUST00000094493 780 ntBASIC13.48□□□□□ -0.25
Sh2d1aO88890 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.48□□□□□ -0.25
Sh2d1aO88890 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms